Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Gm14300-201ENSMUST00000120800 946 ntBASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Gm2214-201ENSMUST00000121333 330 ntBASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Gm13131-201ENSMUST00000122228 321 ntBASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Defa-ps3-201ENSMUST00000142705 282 ntBASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Gm15938-201ENSMUST00000150079 635 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Sfta2-202ENSMUST00000174521 649 ntTSL 3 BASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Gm2539-203ENSMUST00000181352 746 ntBASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Mir6912-201ENSMUST00000184456 70 ntBASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Gm37578-201ENSMUST00000192256 1177 ntBASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Gm37491-201ENSMUST00000192552 1111 ntBASIC9.95□□□□□ -0.82
Ube3bQ9ES34 1700008B11Rik-201ENSMUST00000198145 634 ntBASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Gm42502-201ENSMUST00000198550 1089 ntBASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Gm18973-201ENSMUST00000205814 511 ntBASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Mrpl22-201ENSMUST00000020820 722 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ube3bQ9ES34 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC9.95□□□□□ -0.82
Ube3bQ9ES34 AC132304.1-201ENSMUST00000218860 135 ntBASIC9.95□□□□□ -0.82
Ube3bQ9ES34 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Serpinb6d-202ENSMUST00000221681 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ube3bQ9ES34 AC124709.1-201ENSMUST00000227296 620 ntBASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Prap1-201ENSMUST00000026540 620 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Nsun3-201ENSMUST00000063089 3813 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Mir486-201ENSMUST00000093576 128 ntBASIC9.95□□□□□ -0.82
Ube3bQ9ES34 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Zfp148-201ENSMUST00000089677 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Serpina1a-202ENSMUST00000085056 1360 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Gm15999-201ENSMUST00000127317 1511 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Olfr1350-202ENSMUST00000207221 1521 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Gm16434-201ENSMUST00000100888 2066 ntAPPRIS P5 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Gm6676-201ENSMUST00000166493 2066 ntAPPRIS P5 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Myo16-202ENSMUST00000207204 6719 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Erc2-210ENSMUST00000211145 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Ripor2-203ENSMUST00000091694 3142 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Mtbp-205ENSMUST00000170046 3197 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Ogdhl-201ENSMUST00000022480 3449 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Fbxo11-201ENSMUST00000005504 4019 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Stk11ip-202ENSMUST00000113553 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ube3bQ9ES34 Zmym1-203ENSMUST00000106102 3852 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ube3bQ9ES34 AC115746.1-201ENSMUST00000228949 3617 ntBASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Lmx1a-202ENSMUST00000111377 3200 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Carhsp1-201ENSMUST00000008537 2849 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Prpf8-202ENSMUST00000102510 7249 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Gpr63-201ENSMUST00000038920 2370 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ube3bQ9ES34 3110009F21Rik-201ENSMUST00000223217 1625 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Dtna-201ENSMUST00000047954 1596 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Gm16429-201ENSMUST00000179824 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Gm14976-201ENSMUST00000117055 1394 ntBASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Hk1-203ENSMUST00000116238 3851 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Ighv5-6-201ENSMUST00000103446 353 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Tmem91-202ENSMUST00000108404 485 ntTSL 5 BASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Gm17132-201ENSMUST00000109542 1158 ntBASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Gm6429-201ENSMUST00000117144 475 ntBASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Gm14056-201ENSMUST00000117198 642 ntBASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Gm13702-201ENSMUST00000118542 825 ntBASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Gm15385-201ENSMUST00000118725 667 ntBASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Gm3931-201ENSMUST00000119038 455 ntBASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Gm14554-201ENSMUST00000119548 661 ntBASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Gm12594-201ENSMUST00000132140 499 ntTSL 3 BASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Gm15857-201ENSMUST00000133476 789 ntTSL 3 BASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Gm23822-201ENSMUST00000158739 128 ntBASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Gm17051-201ENSMUST00000170787 487 ntBASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Gm37371-201ENSMUST00000194837 392 ntBASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Gm43069-201ENSMUST00000201006 859 ntTSL 3 BASIC9.94□□□□□ -0.82
Ube3bQ9ES34 1600020E01Rik-203ENSMUST00000204008 713 ntTSL 5 BASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Gm33882-201ENSMUST00000208990 651 ntBASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Gm18899-201ENSMUST00000217663 546 ntBASIC9.94□□□□□ -0.82
Ube3bQ9ES34 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC9.94□□□□□ -0.82
Ube3bQ9ES34 AC154633.1-201ENSMUST00000223276 449 ntBASIC9.94□□□□□ -0.82
Ube3bQ9ES34 AC192333.4-201ENSMUST00000224269 981 ntBASIC9.94□□□□□ -0.82
Ube3bQ9ES34 AC131100.1-201ENSMUST00000226328 470 ntBASIC9.94□□□□□ -0.82
Ube3bQ9ES34 AC122393.1-201ENSMUST00000226570 319 ntBASIC9.94□□□□□ -0.82
Ube3bQ9ES34 AC114585.2-203ENSMUST00000228400 339 ntBASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Apoa2-201ENSMUST00000005824 492 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Gm15433-201ENSMUST00000097671 891 ntBASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Olfr555-201ENSMUST00000098220 948 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Tagap-201ENSMUST00000036370 3076 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Eya3-201ENSMUST00000020197 4976 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Ctnna2-201ENSMUST00000075340 2864 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Grhl3-201ENSMUST00000105855 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Ptbp3-210ENSMUST00000173699 2721 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Zfp866-201ENSMUST00000131784 2680 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Mtbp-204ENSMUST00000169667 2570 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Mrpl19-201ENSMUST00000032124 5000 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Gm26574-201ENSMUST00000181876 2141 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Ncam1-204ENSMUST00000193547 6050 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Hist1h1d-201ENSMUST00000045301 7425 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Ube3bQ9ES34 Nek10-202ENSMUST00000112630 3348 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms