Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Odam-201ENSMUST00000113274 872 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Gm11951-201ENSMUST00000116005 431 ntBASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Myl1-202ENSMUST00000119429 803 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Gm11765-201ENSMUST00000121173 1205 ntBASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Zfp740-205ENSMUST00000121206 795 ntTSL 3 BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Gm13536-201ENSMUST00000132913 766 ntTSL 2 BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Gm371-201ENSMUST00000142240 1245 ntBASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Gm14061-201ENSMUST00000155923 1007 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Gm8813-201ENSMUST00000155930 595 ntBASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Gm23533-201ENSMUST00000157540 245 ntBASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Mlip-212ENSMUST00000184848 1019 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Gm28401-202ENSMUST00000190769 550 ntTSL 5 BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 1700021F13Rik-202ENSMUST00000202665 469 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Gm7482-201ENSMUST00000206446 505 ntBASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Gm7424-201ENSMUST00000206919 902 ntBASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Gm44588-201ENSMUST00000208401 545 ntTSL 5 BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Gm45842-201ENSMUST00000211876 753 ntTSL 3 BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Gm35501-202ENSMUST00000215101 459 ntTSL 3 BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 AC125543.2-201ENSMUST00000222114 105 ntBASIC7.32□□□□□ -1.24
Ska1Q9CPV1 CT030170.7-201ENSMUST00000223372 103 ntBASIC7.32□□□□□ -1.24
Ska1Q9CPV1 AC160930.2-201ENSMUST00000226608 303 ntBASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Spink10-201ENSMUST00000055725 1113 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Gm6083-201ENSMUST00000075518 357 ntBASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Gm5614-201ENSMUST00000091097 318 ntBASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Nprl2-201ENSMUST00000010201 1441 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Gm37078-201ENSMUST00000193314 2009 ntBASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ska1Q9CPV1 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Erp44-201ENSMUST00000030028 2624 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ska1Q9CPV1 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Ska1Q9CPV1 1810053B23Rik-204ENSMUST00000185971 1309 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Igsf1-203ENSMUST00000114891 1761 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Gm24938-201ENSMUST00000102225 110 ntBASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Zbtb26-202ENSMUST00000102789 2047 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Gm25762-201ENSMUST00000103984 132 ntBASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Paqr5-202ENSMUST00000113990 1073 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Gm11241-201ENSMUST00000117371 896 ntBASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Gm15763-201ENSMUST00000120136 403 ntBASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Olfr268-ps1-201ENSMUST00000121395 945 ntBASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Gm13872-203ENSMUST00000147082 657 ntTSL 3 BASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Gm16585-201ENSMUST00000161442 610 ntBASIC7.31□□□□□ -1.24
Ska1Q9CPV1 A530032D15Rik-203ENSMUST00000161724 789 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Gm17188-202ENSMUST00000165178 680 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Nup37-202ENSMUST00000169309 1277 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Gm8046-201ENSMUST00000172151 616 ntBASIC7.31□□□□□ -1.24
Ska1Q9CPV1 4933406F09Rik-202ENSMUST00000180508 680 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Gm28065-201ENSMUST00000185290 833 ntTSL 3 BASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Gm29290-201ENSMUST00000185385 597 ntTSL 3 BASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Gm28864-201ENSMUST00000189251 644 ntBASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Gm26901-204ENSMUST00000193732 631 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Gm37185-201ENSMUST00000193852 410 ntBASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Gm17530-201ENSMUST00000194336 472 ntBASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Gm32102-201ENSMUST00000196885 241 ntBASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Gm43743-201ENSMUST00000197898 697 ntBASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Gm43837-201ENSMUST00000200306 668 ntTSL 5 BASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Gm19172-201ENSMUST00000203170 1246 ntBASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Gm8952-201ENSMUST00000206828 1102 ntBASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Gm8575-201ENSMUST00000210262 521 ntBASIC7.31□□□□□ -1.24
Ska1Q9CPV1 2310003N18Rik-201ENSMUST00000215655 458 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Olfr371-202ENSMUST00000218663 1162 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Gm7239-201ENSMUST00000220981 860 ntBASIC7.31□□□□□ -1.24
Ska1Q9CPV1 AC159193.3-201ENSMUST00000221902 2622 ntBASIC7.31□□□□□ -1.24
Ska1Q9CPV1 AC129975.2-201ENSMUST00000223705 775 ntBASIC7.31□□□□□ -1.24
Ska1Q9CPV1 AC207128.2-202ENSMUST00000224010 808 ntBASIC7.31□□□□□ -1.24
Ska1Q9CPV1 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC7.31□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms