Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Scrt1Q99M85 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Scrt1Q99M85 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Scrt1Q99M85 Serpina3h-202ENSMUST00000116393 1226 ntBASIC6.86□□□□□ -1.31
Scrt1Q99M85 Gm15129-201ENSMUST00000119673 279 ntBASIC6.86□□□□□ -1.31
Scrt1Q99M85 Gm14531-201ENSMUST00000120845 285 ntBASIC6.86□□□□□ -1.31
Scrt1Q99M85 Gm13358-201ENSMUST00000121427 569 ntBASIC6.86□□□□□ -1.31
Scrt1Q99M85 Gm16174-201ENSMUST00000137373 402 ntTSL 2 BASIC6.86□□□□□ -1.31
Scrt1Q99M85 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Scrt1Q99M85 Gm24782-201ENSMUST00000157641 132 ntBASIC6.86□□□□□ -1.31
Scrt1Q99M85 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC6.86□□□□□ -1.31
Scrt1Q99M85 Gm3513-201ENSMUST00000161319 637 ntTSL 3 BASIC6.86□□□□□ -1.31
Scrt1Q99M85 Traj54-201ENSMUST00000165071 54 ntBASIC6.86□□□□□ -1.31
Scrt1Q99M85 Gm23639-201ENSMUST00000175078 132 ntBASIC6.86□□□□□ -1.31
Scrt1Q99M85 Gm20637-201ENSMUST00000175715 462 ntBASIC6.86□□□□□ -1.31
Scrt1Q99M85 Mlip-212ENSMUST00000184848 1019 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Scrt1Q99M85 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Scrt1Q99M85 Plut-203ENSMUST00000201192 569 ntTSL 3 BASIC6.86□□□□□ -1.31
Scrt1Q99M85 Gm44722-201ENSMUST00000206473 436 ntBASIC6.86□□□□□ -1.31
Scrt1Q99M85 Gm45042-201ENSMUST00000207377 211 ntBASIC6.86□□□□□ -1.31
Scrt1Q99M85 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Scrt1Q99M85 Gm45074-201ENSMUST00000209091 1240 ntBASIC6.86□□□□□ -1.31
Scrt1Q99M85 AC192334.3-201ENSMUST00000221828 569 ntTSL 5 BASIC6.86□□□□□ -1.31
Scrt1Q99M85 Gcnt2-204ENSMUST00000223570 335 ntBASIC6.86□□□□□ -1.31
Scrt1Q99M85 AC133598.4-201ENSMUST00000224577 454 ntBASIC6.86□□□□□ -1.31
Scrt1Q99M85 AC139209.2-201ENSMUST00000227680 1208 ntBASIC6.86□□□□□ -1.31
Scrt1Q99M85 CT009556.2-201ENSMUST00000227980 1123 ntBASIC6.86□□□□□ -1.31
Scrt1Q99M85 AC171241.2-201ENSMUST00000228744 892 ntBASIC6.86□□□□□ -1.31
Scrt1Q99M85 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Scrt1Q99M85 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Scrt1Q99M85 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Scrt1Q99M85 Adam5-202ENSMUST00000118419 2791 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
Scrt1Q99M85 Arhgap12-212ENSMUST00000182559 4265 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
Scrt1Q99M85 Prom1-204ENSMUST00000087442 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Scrt1Q99M85 Ash1l-202ENSMUST00000186583 11644 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Scrt1Q99M85 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Scrt1Q99M85 Gm43970-201ENSMUST00000204346 3605 ntBASIC6.86□□□□□ -1.31
Scrt1Q99M85 Tbc1d14-215ENSMUST00000146430 4582 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
Scrt1Q99M85 Tbc1d14-201ENSMUST00000031094 4590 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
Scrt1Q99M85 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC6.86□□□□□ -1.31
Scrt1Q99M85 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Scrt1Q99M85 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Scrt1Q99M85 Tmem161b-206ENSMUST00000225069 2414 ntBASIC6.86□□□□□ -1.31
Scrt1Q99M85 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Scrt1Q99M85 Gm26719-201ENSMUST00000180395 3220 ntTSL 5 BASIC6.86□□□□□ -1.31
Scrt1Q99M85 Naalad2-204ENSMUST00000166825 2799 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Scrt1Q99M85 Atp8a1-207ENSMUST00000135930 8069 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Scrt1Q99M85 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Scrt1Q99M85 Gosr1-201ENSMUST00000010536 4289 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Scrt1Q99M85 Olfr97-206ENSMUST00000216225 1847 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Scrt1Q99M85 Gm42636-201ENSMUST00000197174 2239 ntBASIC6.85□□□□□ -1.31
Scrt1Q99M85 AC130219.1-201ENSMUST00000228406 3433 ntBASIC6.85□□□□□ -1.31
Scrt1Q99M85 Ezh1-202ENSMUST00000107284 4207 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Scrt1Q99M85 Rin3-204ENSMUST00000133820 3755 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Scrt1Q99M85 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC6.85□□□□□ -1.31
Scrt1Q99M85 AC125409.2-201ENSMUST00000221888 2158 ntBASIC6.85□□□□□ -1.31
Scrt1Q99M85 Gm38147-201ENSMUST00000192397 1798 ntBASIC6.85□□□□□ -1.31
Scrt1Q99M85 Zfp474-202ENSMUST00000209270 2113 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Scrt1Q99M85 Cbx3-204ENSMUST00000114446 1719 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Scrt1Q99M85 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC6.85□□□□□ -1.31
Scrt1Q99M85 Serpina3a-203ENSMUST00000185595 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Scrt1Q99M85 Mpdz-216ENSMUST00000220807 6295 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Scrt1Q99M85 Zfp750-201ENSMUST00000092298 3232 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Scrt1Q99M85 Gm20388-201ENSMUST00000127664 3953 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Scrt1Q99M85 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Scrt1Q99M85 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC6.85□□□□□ -1.31
Scrt1Q99M85 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC6.85□□□□□ -1.31
Scrt1Q99M85 Gm37706-201ENSMUST00000195379 2765 ntBASIC6.85□□□□□ -1.31
Scrt1Q99M85 Gm45708-202ENSMUST00000212785 2752 ntTSL 5 BASIC6.85□□□□□ -1.31
Scrt1Q99M85 Npm1-203ENSMUST00000101375 966 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Scrt1Q99M85 Mir669e-201ENSMUST00000117003 119 ntBASIC6.85□□□□□ -1.31
Scrt1Q99M85 Fau-ps2-201ENSMUST00000119333 371 ntBASIC6.85□□□□□ -1.31
Scrt1Q99M85 Gm13649-201ENSMUST00000122325 606 ntBASIC6.85□□□□□ -1.31
Scrt1Q99M85 Gm13724-201ENSMUST00000122395 1155 ntBASIC6.85□□□□□ -1.31
Scrt1Q99M85 B430319H21Rik-201ENSMUST00000123420 734 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Scrt1Q99M85 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC6.85□□□□□ -1.31
Scrt1Q99M85 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC6.85□□□□□ -1.31
Scrt1Q99M85 Gm12126-201ENSMUST00000147717 619 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Scrt1Q99M85 Gm24442-201ENSMUST00000157238 327 ntBASIC6.85□□□□□ -1.31
Scrt1Q99M85 Gm22224-201ENSMUST00000157357 93 ntBASIC6.85□□□□□ -1.31
Scrt1Q99M85 Scarna17-201ENSMUST00000158064 79 ntBASIC6.85□□□□□ -1.31
Scrt1Q99M85 Gm16103-201ENSMUST00000163003 1279 ntBASIC6.85□□□□□ -1.31
Scrt1Q99M85 Gm20500-201ENSMUST00000174621 321 ntTSL 3 BASIC6.85□□□□□ -1.31
Scrt1Q99M85 Gm22702-201ENSMUST00000175372 69 ntBASIC6.85□□□□□ -1.31
Scrt1Q99M85 Gm15251-201ENSMUST00000177947 883 ntBASIC6.85□□□□□ -1.31
Scrt1Q99M85 Gm16596-201ENSMUST00000180576 604 ntTSL 3 BASIC6.85□□□□□ -1.31
Scrt1Q99M85 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Scrt1Q99M85 Mir8099-2-201ENSMUST00000183568 127 ntBASIC6.85□□□□□ -1.31
Scrt1Q99M85 Mir8099-1-201ENSMUST00000184238 127 ntBASIC6.85□□□□□ -1.31
Scrt1Q99M85 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC6.85□□□□□ -1.31
Scrt1Q99M85 4930533D04Rik-201ENSMUST00000185478 788 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Scrt1Q99M85 Gm42808-201ENSMUST00000198212 285 ntTSL 5 BASIC6.85□□□□□ -1.31
Scrt1Q99M85 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Scrt1Q99M85 Gm45401-201ENSMUST00000209456 733 ntBASIC6.85□□□□□ -1.31
Scrt1Q99M85 Gm3011-201ENSMUST00000215669 582 ntBASIC6.85□□□□□ -1.31
Scrt1Q99M85 Gm4977-201ENSMUST00000215709 1262 ntBASIC6.85□□□□□ -1.31
Scrt1Q99M85 Gm29807-201ENSMUST00000220161 372 ntBASIC6.85□□□□□ -1.31
Scrt1Q99M85 AC132587.1-201ENSMUST00000220562 166 ntBASIC6.85□□□□□ -1.31
Scrt1Q99M85 Gm7239-201ENSMUST00000220981 860 ntBASIC6.85□□□□□ -1.31
Scrt1Q99M85 AC134462.1-201ENSMUST00000223047 552 ntTSL 2 BASIC6.85□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms