Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Gm29028-201ENSMUST00000186297 2166 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 2610203C22Rik-204ENSMUST00000148585 3475 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 1810018F18Rik-202ENSMUST00000189546 1447 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Gm43254-201ENSMUST00000199187 2491 ntBASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 AC162467.2-201ENSMUST00000219397 2571 ntBASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Olfr1284-201ENSMUST00000062407 1774 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Gm6823-201ENSMUST00000120791 1839 ntBASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Dyrk1a-201ENSMUST00000023614 5754 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Gm12124-201ENSMUST00000120504 679 ntBASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Mir1962-201ENSMUST00000157516 121 ntBASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Gm29240-201ENSMUST00000187248 286 ntBASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Gm18207-201ENSMUST00000205486 526 ntBASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Gm30400-202ENSMUST00000210562 2115 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Rtp4-203ENSMUST00000210901 1158 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Gm46317-201ENSMUST00000221103 393 ntBASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 AC123920.1-201ENSMUST00000221449 384 ntBASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Gm7493-201ENSMUST00000085919 626 ntBASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Gm10697-201ENSMUST00000091692 1023 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Tdpoz5-201ENSMUST00000098879 1023 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Olfr1394-202ENSMUST00000216273 3024 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Sf3a1Q8K4Z5 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 Mettl15-201ENSMUST00000081631 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 BC002163-201ENSMUST00000121906 319 ntBASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 Gm16034-201ENSMUST00000156446 480 ntTSL 2 BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 0610012D04Rik-201ENSMUST00000159031 531 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 Traj54-201ENSMUST00000165071 54 ntBASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 Ank3-208ENSMUST00000182029 3825 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 BC065403-202ENSMUST00000184796 1043 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 Gm18797-201ENSMUST00000190809 1174 ntBASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 Gm43815-201ENSMUST00000197676 990 ntBASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 Gm26413-202ENSMUST00000198972 127 ntBASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 Gm44786-201ENSMUST00000208165 1008 ntTSL 5 BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 Vmn1r41-204ENSMUST00000227039 985 ntBASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 Gng2-201ENSMUST00000055100 572 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 Gm22748-201ENSMUST00000082493 136 ntBASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 Olfr742-201ENSMUST00000089836 1120 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 Itgb6-203ENSMUST00000112517 3537 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 AC107740.1-201ENSMUST00000216972 2401 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 3830406C13Rik-201ENSMUST00000112669 2477 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 AC105958.1-201ENSMUST00000214783 2144 ntBASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 AC124675.1-201ENSMUST00000226263 1390 ntBASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 Ms4a13-201ENSMUST00000073380 1375 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 Mas1-206ENSMUST00000162333 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 AC125409.2-201ENSMUST00000221888 2158 ntBASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 Zfp964-201ENSMUST00000169125 1416 ntTSL 3 BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 4930544G11Rik-201ENSMUST00000043382 1406 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 Gm37663-201ENSMUST00000191887 2299 ntBASIC9.47□□□□□ -0.89
Sf3a1Q8K4Z5 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Sf3a1Q8K4Z5 Olfr12-202ENSMUST00000213247 4158 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Sf3a1Q8K4Z5 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Sf3a1Q8K4Z5 Olfr702-204ENSMUST00000219803 1646 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Sf3a1Q8K4Z5 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Sf3a1Q8K4Z5 Lamb3-202ENSMUST00000159955 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Sf3a1Q8K4Z5 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Sf3a1Q8K4Z5 A230001M10Rik-203ENSMUST00000198712 1747 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Sf3a1Q8K4Z5 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms