Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Usp47Q8BY87 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC10.82□□□□□ -0.68
Usp47Q8BY87 Gm4780-201ENSMUST00000213206 1242 ntBASIC10.82□□□□□ -0.68
Usp47Q8BY87 AC105958.1-201ENSMUST00000214783 2144 ntBASIC10.82□□□□□ -0.68
Usp47Q8BY87 Gm18226-201ENSMUST00000215261 521 ntBASIC10.82□□□□□ -0.68
Usp47Q8BY87 Gm32899-201ENSMUST00000219694 207 ntBASIC10.82□□□□□ -0.68
Usp47Q8BY87 Gm44165-201ENSMUST00000203093 1469 ntBASIC10.82□□□□□ -0.68
Usp47Q8BY87 Lig3-211ENSMUST00000173722 5797 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Usp47Q8BY87 Add2-209ENSMUST00000204059 8182 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Usp47Q8BY87 Gm43621-201ENSMUST00000202733 2022 ntBASIC10.82□□□□□ -0.68
Usp47Q8BY87 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Usp47Q8BY87 Gm38359-201ENSMUST00000191884 2225 ntBASIC10.82□□□□□ -0.68
Usp47Q8BY87 9530053A07Rik-204ENSMUST00000150948 7895 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Usp47Q8BY87 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Usp47Q8BY87 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC10.82□□□□□ -0.68
Usp47Q8BY87 Mak-201ENSMUST00000021792 3385 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Usp47Q8BY87 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC10.82□□□□□ -0.68
Usp47Q8BY87 Gm16072-201ENSMUST00000119574 2377 ntBASIC10.82□□□□□ -0.68
Usp47Q8BY87 Med1-203ENSMUST00000107545 8024 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Usp47Q8BY87 Col6a5-201ENSMUST00000165165 8046 ntTSL 5 BASIC10.82□□□□□ -0.68
Usp47Q8BY87 Dgkh-204ENSMUST00000227767 3319 ntBASIC10.82□□□□□ -0.68
Usp47Q8BY87 Vmn2r-ps26-201ENSMUST00000202039 2111 ntBASIC10.82□□□□□ -0.68
Usp47Q8BY87 Hsf2bp-201ENSMUST00000002145 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Usp47Q8BY87 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Usp47Q8BY87 Zfp661-203ENSMUST00000110368 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Usp47Q8BY87 Aff1-201ENSMUST00000031256 8312 ntAPPRIS P4 TSL 5 BASIC10.81□□□□□ -0.68
Usp47Q8BY87 Mapk9-203ENSMUST00000102778 4447 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Usp47Q8BY87 Fam160a1-202ENSMUST00000118408 4445 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Usp47Q8BY87 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Usp47Q8BY87 Flna-203ENSMUST00000114299 8456 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Usp47Q8BY87 Gm6878-201ENSMUST00000100448 2018 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Usp47Q8BY87 Gm22470-201ENSMUST00000104117 130 ntBASIC10.81□□□□□ -0.68
Usp47Q8BY87 Gm23527-201ENSMUST00000104570 130 ntBASIC10.81□□□□□ -0.68
Usp47Q8BY87 Gm11517-201ENSMUST00000119491 387 ntBASIC10.81□□□□□ -0.68
Usp47Q8BY87 Gm24011-201ENSMUST00000157732 268 ntBASIC10.81□□□□□ -0.68
Usp47Q8BY87 D430018E03Rik-201ENSMUST00000181842 3832 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Usp47Q8BY87 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Usp47Q8BY87 Gm7419-201ENSMUST00000209962 925 ntBASIC10.81□□□□□ -0.68
Usp47Q8BY87 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC10.81□□□□□ -0.68
Usp47Q8BY87 AC124450.1-201ENSMUST00000225569 495 ntBASIC10.81□□□□□ -0.68
Usp47Q8BY87 AC110176.1-201ENSMUST00000226219 504 ntBASIC10.81□□□□□ -0.68
Usp47Q8BY87 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC10.81□□□□□ -0.68
Usp47Q8BY87 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Usp47Q8BY87 4932431P20Rik-202ENSMUST00000141713 9288 ntBASIC10.81□□□□□ -0.68
Usp47Q8BY87 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Usp47Q8BY87 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Usp47Q8BY87 Hipk1-203ENSMUST00000118317 7939 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Usp47Q8BY87 Pogz-204ENSMUST00000107269 5966 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Usp47Q8BY87 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Usp47Q8BY87 Hrh2-201ENSMUST00000038101 2789 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Usp47Q8BY87 Gm38302-201ENSMUST00000191676 2076 ntBASIC10.81□□□□□ -0.68
Usp47Q8BY87 AC130219.1-201ENSMUST00000228406 3433 ntBASIC10.81□□□□□ -0.68
Usp47Q8BY87 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
Usp47Q8BY87 Prps1l1-201ENSMUST00000134550 1676 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Usp47Q8BY87 Gm42514-201ENSMUST00000196636 1832 ntBASIC10.81□□□□□ -0.68
Usp47Q8BY87 Cts7-203ENSMUST00000224986 1349 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Usp47Q8BY87 AC107757.2-201ENSMUST00000226370 1466 ntBASIC10.8□□□□□ -0.68
Usp47Q8BY87 Pcdh11x-201ENSMUST00000050239 4442 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Usp47Q8BY87 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Usp47Q8BY87 Gm43571-201ENSMUST00000200067 3098 ntBASIC10.8□□□□□ -0.68
Usp47Q8BY87 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Usp47Q8BY87 Gm42973-201ENSMUST00000197913 3200 ntBASIC10.8□□□□□ -0.68
Usp47Q8BY87 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Usp47Q8BY87 AC132412.1-201ENSMUST00000204155 2724 ntBASIC10.8□□□□□ -0.68
Usp47Q8BY87 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Usp47Q8BY87 Gm6491-201ENSMUST00000118273 990 ntBASIC10.8□□□□□ -0.68
Usp47Q8BY87 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC10.8□□□□□ -0.68
Usp47Q8BY87 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC10.8□□□□□ -0.68
Usp47Q8BY87 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC10.8□□□□□ -0.68
Usp47Q8BY87 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Usp47Q8BY87 Gm5300-201ENSMUST00000182201 1003 ntBASIC10.8□□□□□ -0.68
Usp47Q8BY87 Gm30504-203ENSMUST00000209762 1048 ntTSL 5 BASIC10.8□□□□□ -0.68
Usp47Q8BY87 AC161877.2-201ENSMUST00000226248 545 ntBASIC10.8□□□□□ -0.68
Usp47Q8BY87 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Usp47Q8BY87 Tmed5-201ENSMUST00000002837 3800 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Usp47Q8BY87 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Usp47Q8BY87 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Usp47Q8BY87 Pcdh15-216ENSMUST00000131724 6322 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Usp47Q8BY87 AC115746.1-201ENSMUST00000228949 3617 ntBASIC10.8□□□□□ -0.68
Usp47Q8BY87 Rreb1-201ENSMUST00000037232 8395 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Usp47Q8BY87 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Usp47Q8BY87 Gm44116-201ENSMUST00000204269 1525 ntBASIC10.8□□□□□ -0.68
Usp47Q8BY87 Gm8995-202ENSMUST00000208417 3490 ntBASIC10.8□□□□□ -0.68
Usp47Q8BY87 Gm42969-201ENSMUST00000199858 3631 ntBASIC10.8□□□□□ -0.68
Usp47Q8BY87 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Usp47Q8BY87 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Usp47Q8BY87 Plec-202ENSMUST00000054449 15018 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Usp47Q8BY87 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Usp47Q8BY87 L3mbtl3-201ENSMUST00000040219 4572 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Usp47Q8BY87 Gm20731-201ENSMUST00000193462 2288 ntBASIC10.79□□□□□ -0.68
Usp47Q8BY87 Gm25276-201ENSMUST00000104300 124 ntBASIC10.79□□□□□ -0.68
Usp47Q8BY87 Gm26016-201ENSMUST00000104403 129 ntBASIC10.79□□□□□ -0.68
Usp47Q8BY87 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC10.79□□□□□ -0.68
Usp47Q8BY87 Gm7502-201ENSMUST00000169235 733 ntBASIC10.79□□□□□ -0.68
Usp47Q8BY87 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Usp47Q8BY87 Gm43040-201ENSMUST00000202399 558 ntBASIC10.79□□□□□ -0.68
Usp47Q8BY87 AC166361.1-201ENSMUST00000218567 403 ntTSL 3 BASIC10.79□□□□□ -0.68
Usp47Q8BY87 AC147245.1-201ENSMUST00000223294 677 ntBASIC10.79□□□□□ -0.68
Usp47Q8BY87 Gcnt2-204ENSMUST00000223570 335 ntBASIC10.79□□□□□ -0.68
Usp47Q8BY87 Mphosph6-201ENSMUST00000034303 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms