Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm5644-201ENSMUST00000122039 465 ntBASIC6.97□□□□□ -1.29
Col8a1Q00780 Gm13724-201ENSMUST00000122395 1155 ntBASIC6.97□□□□□ -1.29
Col8a1Q00780 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col8a1Q00780 Gm14503-201ENSMUST00000130337 1164 ntBASIC6.97□□□□□ -1.29
Col8a1Q00780 Gm13415-202ENSMUST00000135829 565 ntTSL 3 BASIC6.97□□□□□ -1.29
Col8a1Q00780 Rps12-ps9-201ENSMUST00000139165 399 ntBASIC6.97□□□□□ -1.29
Col8a1Q00780 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Col8a1Q00780 Gm23077-201ENSMUST00000157854 116 ntBASIC6.97□□□□□ -1.29
Col8a1Q00780 Phf11d-202ENSMUST00000160425 1281 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Col8a1Q00780 Gm3239-202ENSMUST00000169675 519 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Col8a1Q00780 Gm17572-201ENSMUST00000171455 420 ntBASIC6.97□□□□□ -1.29
Col8a1Q00780 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC6.97□□□□□ -1.29
Col8a1Q00780 Gm3002-202ENSMUST00000178256 444 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Col8a1Q00780 Gm3252-202ENSMUST00000178748 450 ntTSL 5 BASIC6.97□□□□□ -1.29
Col8a1Q00780 Trav9d-2-201ENSMUST00000178824 337 ntAPPRIS ALT2 BASIC6.97□□□□□ -1.29
Col8a1Q00780 Trav9n-2-201ENSMUST00000180097 337 ntAPPRIS ALT2 BASIC6.97□□□□□ -1.29
Col8a1Q00780 Gm2974-202ENSMUST00000180184 447 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Col8a1Q00780 Mir8095-201ENSMUST00000185103 129 ntBASIC6.97□□□□□ -1.29
Col8a1Q00780 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Col8a1Q00780 1700029J03Rik-202ENSMUST00000189879 712 ntTSL 5 BASIC6.97□□□□□ -1.29
Col8a1Q00780 Ighv1-29-201ENSMUST00000194116 342 ntBASIC6.97□□□□□ -1.29
Col8a1Q00780 Gm36997-201ENSMUST00000195090 707 ntBASIC6.97□□□□□ -1.29
Col8a1Q00780 Gm43489-201ENSMUST00000196810 993 ntBASIC6.97□□□□□ -1.29
Col8a1Q00780 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Col8a1Q00780 Gm43797-201ENSMUST00000198221 532 ntBASIC6.97□□□□□ -1.29
Col8a1Q00780 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC6.97□□□□□ -1.29
Col8a1Q00780 Gm42952-206ENSMUST00000199324 506 ntTSL 3 BASIC6.97□□□□□ -1.29
Col8a1Q00780 Gm43657-201ENSMUST00000200336 3833 ntBASIC6.97□□□□□ -1.29
Col8a1Q00780 Gm44112-201ENSMUST00000204787 372 ntBASIC6.97□□□□□ -1.29
Col8a1Q00780 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col8a1Q00780 Gm18207-201ENSMUST00000205486 526 ntBASIC6.97□□□□□ -1.29
Col8a1Q00780 Gm2788-205ENSMUST00000209849 933 ntTSL 5 BASIC6.97□□□□□ -1.29
Col8a1Q00780 Gm18860-201ENSMUST00000212029 764 ntBASIC6.97□□□□□ -1.29
Col8a1Q00780 Rnf212-206ENSMUST00000212212 924 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Col8a1Q00780 AC120386.1-201ENSMUST00000213434 736 ntTSL 5 BASIC6.97□□□□□ -1.29
Col8a1Q00780 Olfr1115-203ENSMUST00000214119 2455 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Col8a1Q00780 Olfr362-203ENSMUST00000215927 1210 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
Col8a1Q00780 Gm18387-201ENSMUST00000220333 702 ntBASIC6.97□□□□□ -1.29
Col8a1Q00780 Gm18629-201ENSMUST00000222496 884 ntBASIC6.97□□□□□ -1.29
Col8a1Q00780 AC160340.1-201ENSMUST00000222952 3964 ntBASIC6.97□□□□□ -1.29
Col8a1Q00780 AC133598.3-204ENSMUST00000224260 767 ntBASIC6.97□□□□□ -1.29
Col8a1Q00780 Zfp874a-208ENSMUST00000225479 1092 ntBASIC6.97□□□□□ -1.29
Col8a1Q00780 AC154692.1-202ENSMUST00000226632 1231 ntBASIC6.97□□□□□ -1.29
Col8a1Q00780 AC137950.3-201ENSMUST00000228250 246 ntBASIC6.97□□□□□ -1.29
Col8a1Q00780 Spag11a-201ENSMUST00000058955 436 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col8a1Q00780 Pfdn5-202ENSMUST00000062492 464 ntTSL 3 BASIC6.97□□□□□ -1.29
Col8a1Q00780 Gm22362-201ENSMUST00000083102 134 ntBASIC6.97□□□□□ -1.29
Col8a1Q00780 Gm44280-201ENSMUST00000204498 3111 ntBASIC6.97□□□□□ -1.29
Col8a1Q00780 AC122397.1-201ENSMUST00000228650 2819 ntBASIC6.97□□□□□ -1.29
Col8a1Q00780 Asph-208ENSMUST00000108334 2685 ntTSL 5 BASIC6.97□□□□□ -1.29
Col8a1Q00780 Myt1-203ENSMUST00000108757 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col8a1Q00780 Synj2-205ENSMUST00000115786 2531 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Col8a1Q00780 Btn2a2-203ENSMUST00000110433 2370 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col8a1Q00780 Gm37091-201ENSMUST00000195455 2087 ntBASIC6.97□□□□□ -1.29
Col8a1Q00780 Gm44550-201ENSMUST00000207311 2058 ntBASIC6.97□□□□□ -1.29
Col8a1Q00780 Gm39041-201ENSMUST00000205557 3902 ntBASIC6.97□□□□□ -1.29
Col8a1Q00780 St3gal6-201ENSMUST00000114357 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col8a1Q00780 Lipc-201ENSMUST00000034731 1920 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col8a1Q00780 Hmgcs1-202ENSMUST00000224188 3464 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Col8a1Q00780 Extl2-202ENSMUST00000106501 2887 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Col8a1Q00780 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Col8a1Q00780 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Col8a1Q00780 Mtbp-204ENSMUST00000169667 2570 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Col8a1Q00780 Ctnna1-201ENSMUST00000042345 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col8a1Q00780 Osgepl1-202ENSMUST00000114484 2283 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col8a1Q00780 Nup107-202ENSMUST00000167943 3098 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col8a1Q00780 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC6.97□□□□□ -1.29
Col8a1Q00780 AC154461.2-201ENSMUST00000225462 1980 ntBASIC6.97□□□□□ -1.29
Col8a1Q00780 Gm13302-201ENSMUST00000119405 1849 ntBASIC6.97□□□□□ -1.29
Col8a1Q00780 D830005E20Rik-201ENSMUST00000217716 1844 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Col8a1Q00780 Grip1-213ENSMUST00000147454 4520 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Col8a1Q00780 Gm4279-201ENSMUST00000154314 2329 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Col8a1Q00780 Cyp4a29-201ENSMUST00000118278 1530 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
Col8a1Q00780 A530040E14Rik-201ENSMUST00000093501 1515 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Col8a1Q00780 2900027M19Rik-201ENSMUST00000207411 4448 ntBASIC6.96□□□□□ -1.29
Col8a1Q00780 Grm8-201ENSMUST00000090512 2830 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Col8a1Q00780 Zfp652-202ENSMUST00000107717 10433 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
Col8a1Q00780 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Col8a1Q00780 Cdon-201ENSMUST00000042842 7213 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Col8a1Q00780 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
Col8a1Q00780 Slc14a1-202ENSMUST00000160292 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
Col8a1Q00780 AC125020.1-201ENSMUST00000220137 2225 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Col8a1Q00780 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
Col8a1Q00780 Ufm1-203ENSMUST00000146598 4890 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Col8a1Q00780 Pabpc6-201ENSMUST00000057190 3208 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
Col8a1Q00780 Etl4-205ENSMUST00000114607 3055 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
Col8a1Q00780 Gm7444-201ENSMUST00000217455 2428 ntBASIC6.96□□□□□ -1.3
Col8a1Q00780 Gm27166-201ENSMUST00000184476 1930 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Col8a1Q00780 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC6.96□□□□□ -1.3
Col8a1Q00780 Mbtps1-202ENSMUST00000098362 4336 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col8a1Q00780 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Col8a1Q00780 Igkv6-25-201ENSMUST00000103383 380 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Col8a1Q00780 Ighv5-6-201ENSMUST00000103446 353 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Col8a1Q00780 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Col8a1Q00780 Oprm1-217ENSMUST00000105615 1258 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Col8a1Q00780 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC6.96□□□□□ -1.3
Col8a1Q00780 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
Col8a1Q00780 Gm12383-201ENSMUST00000120628 760 ntBASIC6.96□□□□□ -1.3
Col8a1Q00780 Gm5931-201ENSMUST00000121308 477 ntBASIC6.96□□□□□ -1.3
Col8a1Q00780 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC6.96□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms