Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Nphp4P59240 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Nphp4P59240 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC10.36□□□□□ -0.75
Nphp4P59240 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC10.36□□□□□ -0.75
Nphp4P59240 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Nphp4P59240 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC10.36□□□□□ -0.75
Nphp4P59240 Gm8715-201ENSMUST00000162728 531 ntBASIC10.36□□□□□ -0.75
Nphp4P59240 Gm8046-201ENSMUST00000172151 616 ntBASIC10.36□□□□□ -0.75
Nphp4P59240 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Nphp4P59240 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nphp4P59240 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC10.36□□□□□ -0.75
Nphp4P59240 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC10.36□□□□□ -0.75
Nphp4P59240 Gm42734-201ENSMUST00000201656 878 ntBASIC10.36□□□□□ -0.75
Nphp4P59240 AC134913.1-201ENSMUST00000224563 504 ntBASIC10.36□□□□□ -0.75
Nphp4P59240 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Nphp4P59240 Ifit1bl2-202ENSMUST00000112463 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nphp4P59240 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC10.36□□□□□ -0.75
Nphp4P59240 Tmem52b-201ENSMUST00000032263 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nphp4P59240 Rgs8-203ENSMUST00000111812 3625 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Nphp4P59240 Tnfaip1-202ENSMUST00000108277 3768 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nphp4P59240 Grip1-213ENSMUST00000147454 4520 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Nphp4P59240 Tdrd1-204ENSMUST00000121249 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nphp4P59240 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nphp4P59240 Chordc1-201ENSMUST00000001825 5789 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nphp4P59240 Hdac4-201ENSMUST00000008995 3937 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nphp4P59240 Plagl2-202ENSMUST00000109795 5571 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nphp4P59240 Gm10259-201ENSMUST00000091289 1590 ntBASIC10.36□□□□□ -0.75
Nphp4P59240 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nphp4P59240 Supt20-202ENSMUST00000170552 1968 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nphp4P59240 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nphp4P59240 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nphp4P59240 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nphp4P59240 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC10.35□□□□□ -0.75
Nphp4P59240 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Nphp4P59240 Nup133-201ENSMUST00000044795 5808 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nphp4P59240 Olfr978-202ENSMUST00000217600 1790 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Nphp4P59240 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nphp4P59240 Erc1-203ENSMUST00000183703 8760 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nphp4P59240 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nphp4P59240 Tmem35a-201ENSMUST00000037687 1918 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nphp4P59240 Gm5903-201ENSMUST00000121836 2325 ntBASIC10.35□□□□□ -0.75
Nphp4P59240 Erc2-201ENSMUST00000090302 6083 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nphp4P59240 Tcf4-206ENSMUST00000114982 3694 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nphp4P59240 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC10.35□□□□□ -0.75
Nphp4P59240 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Nphp4P59240 Gm15739-201ENSMUST00000118049 872 ntBASIC10.35□□□□□ -0.75
Nphp4P59240 Gm11850-201ENSMUST00000119679 479 ntBASIC10.35□□□□□ -0.75
Nphp4P59240 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC10.35□□□□□ -0.75
Nphp4P59240 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC10.35□□□□□ -0.75
Nphp4P59240 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC10.35□□□□□ -0.75
Nphp4P59240 Gm27218-201ENSMUST00000183745 392 ntBASIC10.35□□□□□ -0.75
Nphp4P59240 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC10.35□□□□□ -0.75
Nphp4P59240 Gm36932-201ENSMUST00000195226 929 ntBASIC10.35□□□□□ -0.75
Nphp4P59240 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC10.35□□□□□ -0.75
Nphp4P59240 AC134869.2-201ENSMUST00000225788 421 ntBASIC10.35□□□□□ -0.75
Nphp4P59240 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nphp4P59240 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Nphp4P59240 A730049H05Rik-201ENSMUST00000057977 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nphp4P59240 Gm37447-201ENSMUST00000195625 2928 ntBASIC10.35□□□□□ -0.75
Nphp4P59240 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nphp4P59240 Olfr225-202ENSMUST00000213169 2658 ntAPPRIS P5 TSL 5 BASIC10.35□□□□□ -0.75
Nphp4P59240 Gm38315-201ENSMUST00000194286 2437 ntBASIC10.35□□□□□ -0.75
Nphp4P59240 Pcdhb11-201ENSMUST00000053073 4419 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Nphp4P59240 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC10.35□□□□□ -0.75
Nphp4P59240 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nphp4P59240 Gm26888-201ENSMUST00000181119 3683 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nphp4P59240 B430306N03Rik-201ENSMUST00000049614 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nphp4P59240 Gm42576-201ENSMUST00000202336 2846 ntBASIC10.35□□□□□ -0.75
Nphp4P59240 Crb1-201ENSMUST00000059825 5901 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nphp4P59240 Luzp2-201ENSMUST00000082373 4901 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nphp4P59240 Slx4ip-202ENSMUST00000099311 5089 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nphp4P59240 Bach2-207ENSMUST00000171600 8493 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nphp4P59240 Lrba-206ENSMUST00000195524 3322 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nphp4P59240 Rnf19a-203ENSMUST00000228358 3452 ntBASIC10.34□□□□□ -0.75
Nphp4P59240 Gm12959-201ENSMUST00000119396 403 ntBASIC10.34□□□□□ -0.75
Nphp4P59240 Gm11895-201ENSMUST00000122165 467 ntBASIC10.34□□□□□ -0.75
Nphp4P59240 Gm22604-201ENSMUST00000157604 311 ntBASIC10.34□□□□□ -0.75
Nphp4P59240 Gm23077-201ENSMUST00000157854 116 ntBASIC10.34□□□□□ -0.75
Nphp4P59240 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Nphp4P59240 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Nphp4P59240 Gm26945-201ENSMUST00000183191 2011 ntBASIC10.34□□□□□ -0.75
Nphp4P59240 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nphp4P59240 Gm37382-201ENSMUST00000193032 1596 ntBASIC10.34□□□□□ -0.75
Nphp4P59240 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC10.34□□□□□ -0.75
Nphp4P59240 Gm4972-201ENSMUST00000211108 1254 ntBASIC10.34□□□□□ -0.75
Nphp4P59240 Gm45725-201ENSMUST00000212962 337 ntBASIC10.34□□□□□ -0.75
Nphp4P59240 AC133948.2-201ENSMUST00000217850 378 ntBASIC10.34□□□□□ -0.75
Nphp4P59240 Gm5791-201ENSMUST00000220840 489 ntBASIC10.34□□□□□ -0.75
Nphp4P59240 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Nphp4P59240 Apobec4-201ENSMUST00000068875 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nphp4P59240 Gm22504-201ENSMUST00000082963 139 ntBASIC10.34□□□□□ -0.75
Nphp4P59240 Tmem175-202ENSMUST00000078323 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nphp4P59240 Stag1-201ENSMUST00000041418 5909 ntTSL 5 BASIC10.34□□□□□ -0.75
Nphp4P59240 Fam214a-201ENSMUST00000081746 3795 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nphp4P59240 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nphp4P59240 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nphp4P59240 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nphp4P59240 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nphp4P59240 Gm42514-201ENSMUST00000196636 1832 ntBASIC10.34□□□□□ -0.75
Nphp4P59240 Musk-203ENSMUST00000098057 3422 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 139.1 ms