Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm43890-201ENSMUST00000203437 2799 ntBASIC7.7□□□□□ -1.18
Nup43P59235 Klrb1b-201ENSMUST00000032472 2228 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Nup43P59235 Rapgef4-202ENSMUST00000090826 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Nup43P59235 AC154171.3-201ENSMUST00000224519 2505 ntBASIC7.7□□□□□ -1.18
Nup43P59235 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Nup43P59235 Gucy2c-201ENSMUST00000032338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup43P59235 Asb11-202ENSMUST00000036858 1445 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup43P59235 Pcdh15-228ENSMUST00000152819 2867 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Nup43P59235 Hmcn2-201ENSMUST00000113532 15646 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Nup43P59235 Optn-202ENSMUST00000114996 2614 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup43P59235 AC122346.2-201ENSMUST00000224326 2931 ntBASIC7.69□□□□□ -1.18
Nup43P59235 Smcr8-202ENSMUST00000102667 3544 ntBASIC7.69□□□□□ -1.18
Nup43P59235 AC187103.1-201ENSMUST00000224641 1475 ntBASIC7.69□□□□□ -1.18
Nup43P59235 Zfp952-201ENSMUST00000087666 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup43P59235 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC7.69□□□□□ -1.18
Nup43P59235 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup43P59235 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC7.69□□□□□ -1.18
Nup43P59235 Gm5681-201ENSMUST00000189217 1533 ntBASIC7.69□□□□□ -1.18
Nup43P59235 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Nup43P59235 Gng7-204ENSMUST00000118233 3433 ntAPPRIS ALT1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup43P59235 Ambn-201ENSMUST00000031226 1854 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup43P59235 Vps8-203ENSMUST00000115397 5032 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Nup43P59235 Vmn2r8-201ENSMUST00000172140 2547 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Nup43P59235 Efr3a-213ENSMUST00000211878 2541 ntTSL 5 BASIC7.69□□□□□ -1.18
Nup43P59235 Spen-201ENSMUST00000078886 12082 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Nup43P59235 Gm4849-201ENSMUST00000188428 2246 ntBASIC7.69□□□□□ -1.18
Nup43P59235 Plb1-206ENSMUST00000202220 4771 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Nup43P59235 Gm13243-201ENSMUST00000117481 565 ntBASIC7.69□□□□□ -1.18
Nup43P59235 Gm11621-201ENSMUST00000118253 589 ntBASIC7.69□□□□□ -1.18
Nup43P59235 Gm13240-201ENSMUST00000120042 565 ntBASIC7.69□□□□□ -1.18
Nup43P59235 Gm5931-201ENSMUST00000121308 477 ntBASIC7.69□□□□□ -1.18
Nup43P59235 Gm11389-201ENSMUST00000121407 430 ntBASIC7.69□□□□□ -1.18
Nup43P59235 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC7.69□□□□□ -1.18
Nup43P59235 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Nup43P59235 1700021N21Rik-201ENSMUST00000131110 904 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Nup43P59235 Banf2os-202ENSMUST00000145504 386 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Nup43P59235 Gm23497-201ENSMUST00000157738 130 ntBASIC7.69□□□□□ -1.18
Nup43P59235 Gm4907-202ENSMUST00000163718 1236 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup43P59235 Gm2966-201ENSMUST00000166052 481 ntBASIC7.69□□□□□ -1.18
Nup43P59235 Gm17204-201ENSMUST00000167936 478 ntBASIC7.69□□□□□ -1.18
Nup43P59235 Tctex1d1-206ENSMUST00000169211 1000 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup43P59235 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC7.69□□□□□ -1.18
Nup43P59235 Gm3002-202ENSMUST00000178256 444 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Nup43P59235 Gm2974-202ENSMUST00000180184 447 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Nup43P59235 Gm29611-201ENSMUST00000186132 1011 ntTSL 5 BASIC7.69□□□□□ -1.18
Nup43P59235 Atp5g3-201ENSMUST00000018914 714 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup43P59235 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Nup43P59235 Gm43846-201ENSMUST00000200502 932 ntBASIC7.69□□□□□ -1.18
Nup43P59235 Gm43809-201ENSMUST00000200694 338 ntTSL 3 BASIC7.69□□□□□ -1.18
Nup43P59235 Gm43069-201ENSMUST00000201006 859 ntTSL 3 BASIC7.69□□□□□ -1.18
Nup43P59235 Gm2566-201ENSMUST00000201267 431 ntBASIC7.69□□□□□ -1.18
Nup43P59235 1600020E01Rik-203ENSMUST00000204008 713 ntTSL 5 BASIC7.69□□□□□ -1.18
Nup43P59235 Gm7482-201ENSMUST00000206446 505 ntBASIC7.69□□□□□ -1.18
Nup43P59235 Kcne3-207ENSMUST00000208260 929 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
Nup43P59235 Chmp2a-204ENSMUST00000211344 606 ntTSL 5 BASIC7.69□□□□□ -1.18
Nup43P59235 Chmp2a-206ENSMUST00000211626 726 ntTSL 2 BASIC7.69□□□□□ -1.18
Nup43P59235 Gm31763-201ENSMUST00000217788 673 ntTSL 3 BASIC7.69□□□□□ -1.18
Nup43P59235 CT010462.1-201ENSMUST00000220554 1200 ntTSL 5 BASIC7.69□□□□□ -1.18
Nup43P59235 Gm21941-201ENSMUST00000221121 562 ntBASIC7.69□□□□□ -1.18
Nup43P59235 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC7.69□□□□□ -1.18
Nup43P59235 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC7.69□□□□□ -1.18
Nup43P59235 1700049L16Rik-201ENSMUST00000049520 543 ntBASIC7.69□□□□□ -1.18
Nup43P59235 Slurp2-201ENSMUST00000057932 545 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup43P59235 Slc36a3-202ENSMUST00000069816 893 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Nup43P59235 Gm5614-201ENSMUST00000091097 318 ntBASIC7.69□□□□□ -1.18
Nup43P59235 Olfr155-201ENSMUST00000095108 1172 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Nup43P59235 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Nup43P59235 Olfr1395-202ENSMUST00000203377 2883 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
Nup43P59235 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup43P59235 Gm43168-201ENSMUST00000201039 1612 ntBASIC7.69□□□□□ -1.18
Nup43P59235 Tmem245-201ENSMUST00000068792 15981 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Nup43P59235 Epb41-201ENSMUST00000030739 6565 ntAPPRIS P3 TSL 5 BASIC7.69□□□□□ -1.18
Nup43P59235 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup43P59235 AC154552.6-201ENSMUST00000221365 1342 ntBASIC7.69□□□□□ -1.18
Nup43P59235 Nol4-202ENSMUST00000081423 3309 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Nup43P59235 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup43P59235 Fgg-201ENSMUST00000048486 1695 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup43P59235 Cwc22-204ENSMUST00000111821 3388 ntAPPRIS P3 TSL 5 BASIC7.69□□□□□ -1.18
Nup43P59235 St6galnac1-201ENSMUST00000009732 2392 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup43P59235 Zfp943-201ENSMUST00000055349 2741 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup43P59235 Btbd16-201ENSMUST00000048453 3434 ntAPPRIS P2 TSL 5 BASIC7.69□□□□□ -1.18
Nup43P59235 Gm21719-202ENSMUST00000189073 1358 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Nup43P59235 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
Nup43P59235 Tnfsf18-201ENSMUST00000086084 2066 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup43P59235 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Nup43P59235 Mtbp-205ENSMUST00000170046 3197 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Nup43P59235 Ndst3-207ENSMUST00000172537 3152 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Nup43P59235 Gm2098-201ENSMUST00000189146 1763 ntBASIC7.69□□□□□ -1.18
Nup43P59235 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Nup43P59235 Gm18594-201ENSMUST00000175733 1403 ntBASIC7.69□□□□□ -1.18
Nup43P59235 4930543E12Rik-202ENSMUST00000210408 1429 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Nup43P59235 Ankrd27-201ENSMUST00000040844 4284 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup43P59235 Creb1-201ENSMUST00000049932 5009 ntTSL 5 BASIC7.69□□□□□ -1.18
Nup43P59235 Pdgfra-208ENSMUST00000202681 2876 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Nup43P59235 Nxpe4-202ENSMUST00000215780 2875 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup43P59235 Npnt-201ENSMUST00000042729 3601 ntAPPRIS P4 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup43P59235 Grik1-202ENSMUST00000072256 3655 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Nup43P59235 Atg4a-201ENSMUST00000112971 2202 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Nup43P59235 Fam216b-201ENSMUST00000066437 2241 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Nup43P59235 Rpl7l1-201ENSMUST00000078286 2606 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms