Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Tpm2P58774 Zwilch-211ENSMUST00000176794 1746 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Tpm2P58774 Gm43953-201ENSMUST00000203709 2867 ntBASIC8.8□□□□□ -1
Tpm2P58774 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Tpm2P58774 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Tpm2P58774 Gm2163-201ENSMUST00000179734 2723 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Tpm2P58774 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC8.8□□□□□ -1
Tpm2P58774 Ighv1-72-201ENSMUST00000103541 396 ntAPPRIS P1 BASIC8.8□□□□□ -1
Tpm2P58774 Gm11833-201ENSMUST00000118393 853 ntBASIC8.8□□□□□ -1
Tpm2P58774 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Tpm2P58774 F730035M05Rik-201ENSMUST00000145871 1296 ntTSL 1 (best) BASIC8.8□□□□□ -1
Tpm2P58774 Gm3275-201ENSMUST00000169145 487 ntBASIC8.8□□□□□ -1
Tpm2P58774 5730435O14Rik-202ENSMUST00000170047 617 ntTSL 1 (best) BASIC8.8□□□□□ -1
Tpm2P58774 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC8.8□□□□□ -1
Tpm2P58774 Gm18353-201ENSMUST00000185906 784 ntBASIC8.8□□□□□ -1
Tpm2P58774 Plet1-202ENSMUST00000188047 739 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Tpm2P58774 Selenok-ps7-201ENSMUST00000197069 283 ntBASIC8.8□□□□□ -1
Tpm2P58774 Gm42775-201ENSMUST00000198407 740 ntTSL 3 BASIC8.8□□□□□ -1
Tpm2P58774 Gm30708-201ENSMUST00000202183 312 ntBASIC8.8□□□□□ -1
Tpm2P58774 Rpl18a-ps4-201ENSMUST00000206176 536 ntBASIC8.8□□□□□ -1
Tpm2P58774 Tmem156-205ENSMUST00000212194 956 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Tpm2P58774 CT030175.1-201ENSMUST00000220822 408 ntBASIC8.8□□□□□ -1
Tpm2P58774 Trap1a-201ENSMUST00000054534 1178 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Tpm2P58774 Olfr24-201ENSMUST00000066997 1157 ntAPPRIS P1 BASIC8.8□□□□□ -1
Tpm2P58774 Olfr1504-201ENSMUST00000078282 1085 ntAPPRIS P1 BASIC8.8□□□□□ -1
Tpm2P58774 Gm15433-201ENSMUST00000097671 891 ntBASIC8.8□□□□□ -1
Tpm2P58774 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Tpm2P58774 Gm19583-201ENSMUST00000202993 1366 ntTSL 1 (best) BASIC8.8□□□□□ -1
Tpm2P58774 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Tpm2P58774 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Tpm2P58774 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Tpm2P58774 Gm43483-201ENSMUST00000196724 2860 ntBASIC8.8□□□□□ -1
Tpm2P58774 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Tpm2P58774 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Tpm2P58774 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Tpm2P58774 Gm14144-201ENSMUST00000128602 1721 ntTSL 1 (best) BASIC8.8□□□□□ -1
Tpm2P58774 4930442J19Rik-202ENSMUST00000157058 1721 ntTSL 1 (best) BASIC8.8□□□□□ -1
Tpm2P58774 Brdt-202ENSMUST00000112677 1607 ntTSL 1 (best) BASIC8.8□□□□□ -1
Tpm2P58774 Prb1-201ENSMUST00000087853 1621 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Tpm2P58774 Dctn5-201ENSMUST00000033156 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Tpm2P58774 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Tpm2P58774 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC8.79□□□□□ -1
Tpm2P58774 AC122356.1-202ENSMUST00000227328 2758 ntBASIC8.79□□□□□ -1
Tpm2P58774 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC8.79□□□□□ -1
Tpm2P58774 AC159002.2-201ENSMUST00000228843 4874 ntBASIC8.79□□□□□ -1
Tpm2P58774 Gm16434-201ENSMUST00000100888 2066 ntAPPRIS P5 TSL 1 (best) BASIC8.79□□□□□ -1
Tpm2P58774 Gm6676-201ENSMUST00000166493 2066 ntAPPRIS P5 TSL 1 (best) BASIC8.79□□□□□ -1
Tpm2P58774 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Tpm2P58774 Prss35-201ENSMUST00000036426 3444 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Tpm2P58774 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC8.79□□□□□ -1
Tpm2P58774 Psma8-201ENSMUST00000040860 1693 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Tpm2P58774 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Tpm2P58774 Slc25a14-202ENSMUST00000114936 1582 ntAPPRIS ALT1 TSL 5 BASIC8.79□□□□□ -1
Tpm2P58774 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC8.79□□□□□ -1
Tpm2P58774 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Tpm2P58774 Ifna13-201ENSMUST00000105149 819 ntAPPRIS P1 BASIC8.79□□□□□ -1
Tpm2P58774 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Tpm2P58774 Tmsb15a-202ENSMUST00000113154 544 ntTSL 5 BASIC8.79□□□□□ -1
Tpm2P58774 Gm11676-201ENSMUST00000120443 490 ntBASIC8.79□□□□□ -1
Tpm2P58774 Gm4908-201ENSMUST00000121923 1005 ntBASIC8.79□□□□□ -1
Tpm2P58774 Myl2-201ENSMUST00000014080 662 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Tpm2P58774 Gm15888-201ENSMUST00000154016 538 ntTSL 2 BASIC8.79□□□□□ -1
Tpm2P58774 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC8.79□□□□□ -1
Tpm2P58774 4930438E09Rik-201ENSMUST00000176841 776 ntTSL 1 (best) BASIC8.79□□□□□ -1
Tpm2P58774 Gm27403-201ENSMUST00000184662 214 ntBASIC8.79□□□□□ -1
Tpm2P58774 Gm29548-201ENSMUST00000187012 694 ntBASIC8.79□□□□□ -1
Tpm2P58774 Gm28105-201ENSMUST00000187788 694 ntBASIC8.79□□□□□ -1
Tpm2P58774 Gm19412-202ENSMUST00000189156 569 ntTSL 3 BASIC8.79□□□□□ -1
Tpm2P58774 Gm30835-201ENSMUST00000198825 689 ntTSL 3 BASIC8.79□□□□□ -1
Tpm2P58774 Lsm5-205ENSMUST00000203958 416 ntTSL 3 BASIC8.79□□□□□ -1
Tpm2P58774 4833412C05Rik-202ENSMUST00000208257 850 ntTSL 3 BASIC8.79□□□□□ -1
Tpm2P58774 4930428N03Rik-205ENSMUST00000225654 892 ntBASIC8.79□□□□□ -1
Tpm2P58774 AC101831.1-201ENSMUST00000228245 691 ntBASIC8.79□□□□□ -1
Tpm2P58774 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Tpm2P58774 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Tpm2P58774 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Tpm2P58774 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC8.79□□□□□ -1
Tpm2P58774 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC8.79□□□□□ -1
Tpm2P58774 Gm43769-201ENSMUST00000201871 4323 ntBASIC8.79□□□□□ -1
Tpm2P58774 Vmn1r176-202ENSMUST00000226319 2930 ntAPPRIS P1 BASIC8.79□□□□□ -1
Tpm2P58774 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
Tpm2P58774 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC8.79□□□□□ -1
Tpm2P58774 C87977-202ENSMUST00000105754 1407 ntAPPRIS ALT2 TSL 3 BASIC8.79□□□□□ -1
Tpm2P58774 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC8.79□□□□□ -1
Tpm2P58774 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC8.79□□□□□ -1
Tpm2P58774 Kctd16-201ENSMUST00000091927 1349 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Tpm2P58774 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Tpm2P58774 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Tpm2P58774 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC8.78□□□□□ -1
Tpm2P58774 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Tpm2P58774 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Tpm2P58774 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC8.78□□□□□ -1
Tpm2P58774 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Tpm2P58774 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC8.78□□□□□ -1
Tpm2P58774 Rps19-ps2-201ENSMUST00000100614 438 ntBASIC8.78□□□□□ -1
Tpm2P58774 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC8.78□□□□□ -1
Tpm2P58774 Gm11763-201ENSMUST00000119964 312 ntBASIC8.78□□□□□ -1
Tpm2P58774 Gm11730-202ENSMUST00000147186 753 ntTSL 1 (best) BASIC8.78□□□□□ -1
Tpm2P58774 Gm26040-201ENSMUST00000158147 161 ntBASIC8.78□□□□□ -1
Tpm2P58774 Stard6-202ENSMUST00000164223 976 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms