Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Sez6l2-203ENSMUST00000106335 3732 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sox1P53783 Trps1-205ENSMUST00000183997 3627 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Sox1P53783 Gm28581-201ENSMUST00000186086 2177 ntBASIC8.41□□□□□ -1.06
Sox1P53783 Grik1-206ENSMUST00000211444 3528 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Sox1P53783 Uhrf1-203ENSMUST00000113038 3483 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sox1P53783 Cd300e-201ENSMUST00000062787 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sox1P53783 Dpysl3-202ENSMUST00000118043 1986 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Sox1P53783 Gm42669-202ENSMUST00000160160 3080 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
Sox1P53783 Gm38147-201ENSMUST00000192397 1798 ntBASIC8.4□□□□□ -1.06
Sox1P53783 Vmn1r-ps128-201ENSMUST00000121211 1739 ntBASIC8.4□□□□□ -1.06
Sox1P53783 4930528G23Rik-201ENSMUST00000124575 1723 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Sox1P53783 Cdh5-201ENSMUST00000034339 3995 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Sox1P53783 Sulf2-207ENSMUST00000146497 3808 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Sox1P53783 Uox-201ENSMUST00000029837 2737 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Sox1P53783 Zswim3-201ENSMUST00000052107 2708 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Sox1P53783 Gm5743-202ENSMUST00000212004 1647 ntBASIC8.4□□□□□ -1.06
Sox1P53783 Nup210l-202ENSMUST00000200410 5710 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Sox1P53783 Sec23ip-201ENSMUST00000042942 4505 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Sox1P53783 Flna-203ENSMUST00000114299 8456 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.06
Sox1P53783 Lpin3-203ENSMUST00000109456 3470 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Sox1P53783 Rbm25-201ENSMUST00000048155 4226 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Sox1P53783 Ppil2-201ENSMUST00000023455 2333 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Sox1P53783 Cfap61-202ENSMUST00000118002 3230 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Sox1P53783 Mgat4e-201ENSMUST00000052911 1360 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Sox1P53783 Gm26541-201ENSMUST00000181866 3973 ntTSL 5 BASIC8.4□□□□□ -1.06
Sox1P53783 Cd22-201ENSMUST00000019248 3974 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Sox1P53783 Hmgn2-ps1-201ENSMUST00000120716 279 ntBASIC8.4□□□□□ -1.06
Sox1P53783 Gm11218-201ENSMUST00000121364 1214 ntBASIC8.4□□□□□ -1.06
Sox1P53783 Gm24383-201ENSMUST00000122691 333 ntBASIC8.4□□□□□ -1.06
Sox1P53783 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
Sox1P53783 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC8.4□□□□□ -1.06
Sox1P53783 Gm17061-201ENSMUST00000163167 499 ntBASIC8.4□□□□□ -1.06
Sox1P53783 Gm4907-202ENSMUST00000163718 1236 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Sox1P53783 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC8.4□□□□□ -1.06
Sox1P53783 Gm26179-201ENSMUST00000177723 132 ntBASIC8.4□□□□□ -1.06
Sox1P53783 Gm10182-201ENSMUST00000178676 273 ntBASIC8.4□□□□□ -1.06
Sox1P53783 Gm26802-201ENSMUST00000181066 2144 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Sox1P53783 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC8.4□□□□□ -1.06
Sox1P53783 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Sox1P53783 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC8.4□□□□□ -1.06
Sox1P53783 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Sox1P53783 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Sox1P53783 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC8.4□□□□□ -1.06
Sox1P53783 Trav22-201ENSMUST00000198117 346 ntBASIC8.4□□□□□ -1.06
Sox1P53783 Gm17822-201ENSMUST00000204307 351 ntBASIC8.4□□□□□ -1.06
Sox1P53783 Gm44018-201ENSMUST00000204471 407 ntBASIC8.4□□□□□ -1.06
Sox1P53783 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC8.4□□□□□ -1.06
Sox1P53783 AC151904.2-201ENSMUST00000218683 1177 ntBASIC8.4□□□□□ -1.06
Sox1P53783 AC123534.1-201ENSMUST00000224060 656 ntBASIC8.4□□□□□ -1.06
Sox1P53783 AC192333.4-201ENSMUST00000224269 981 ntBASIC8.4□□□□□ -1.06
Sox1P53783 AC108945.1-201ENSMUST00000226477 94 ntBASIC8.4□□□□□ -1.06
Sox1P53783 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Sox1P53783 BC023105-201ENSMUST00000073997 1227 ntBASIC8.4□□□□□ -1.06
Sox1P53783 Olfr380-201ENSMUST00000075532 936 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Sox1P53783 Vmn1r64-201ENSMUST00000078475 1011 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Sox1P53783 n-R5s36-201ENSMUST00000082998 119 ntBASIC8.4□□□□□ -1.06
Sox1P53783 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Sox1P53783 Gpm6b-208ENSMUST00000112233 2949 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Sox1P53783 B230323A14Rik-201ENSMUST00000180488 2864 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Sox1P53783 Zfp959-201ENSMUST00000054780 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Sox1P53783 Lrtm2-202ENSMUST00000112756 3569 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Sox1P53783 1700006J14Rik-203ENSMUST00000160091 2629 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Sox1P53783 AC140393.1-202ENSMUST00000228347 1818 ntBASIC8.4□□□□□ -1.07
Sox1P53783 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Sox1P53783 Pcm1-201ENSMUST00000045218 6624 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Sox1P53783 Serpina3a-203ENSMUST00000185595 1720 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Sox1P53783 Pkia-201ENSMUST00000028999 3617 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Sox1P53783 Hnmt-203ENSMUST00000114498 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Sox1P53783 B230118H07Rik-203ENSMUST00000111231 2273 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Sox1P53783 Mavs-201ENSMUST00000041362 2867 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Sox1P53783 Pou2f1-216ENSMUST00000184643 2201 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sox1P53783 Gm38215-201ENSMUST00000192321 2233 ntBASIC8.39□□□□□ -1.07
Sox1P53783 Ednrb-201ENSMUST00000022718 4107 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sox1P53783 Usp28-201ENSMUST00000047349 4133 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sox1P53783 Pcsk2-201ENSMUST00000028905 4723 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sox1P53783 Paqr8-201ENSMUST00000068880 4704 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sox1P53783 Hmgb1-201ENSMUST00000085546 2838 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sox1P53783 Kif26b-202ENSMUST00000161017 13749 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sox1P53783 Gm30373-202ENSMUST00000217507 2709 ntTSL 5 BASIC8.39□□□□□ -1.07
Sox1P53783 Arhgap21-213ENSMUST00000173194 6920 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sox1P53783 Utp6-201ENSMUST00000043152 3877 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sox1P53783 Tsr2-201ENSMUST00000026295 3804 ntTSL 2 BASIC8.39□□□□□ -1.07
Sox1P53783 Mill2-206ENSMUST00000228493 2043 ntAPPRIS P4 BASIC8.39□□□□□ -1.07
Sox1P53783 Nalcn-201ENSMUST00000000201 7122 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Sox1P53783 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC8.39□□□□□ -1.07
Sox1P53783 Ptger2-201ENSMUST00000046891 3684 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sox1P53783 Map2-207ENSMUST00000114018 5303 ntAPPRIS P3 TSL 5 BASIC8.39□□□□□ -1.07
Sox1P53783 Gm10683-201ENSMUST00000211556 1374 ntBASIC8.39□□□□□ -1.07
Sox1P53783 H2-M10.5-201ENSMUST00000041531 1383 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sox1P53783 Ndrg3-203ENSMUST00000109558 4023 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Sox1P53783 Gm40778-201ENSMUST00000217825 1344 ntBASIC8.39□□□□□ -1.07
Sox1P53783 Sez6-201ENSMUST00000000646 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sox1P53783 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Sox1P53783 9330158H04Rik-208ENSMUST00000161820 2324 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Sox1P53783 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sox1P53783 Trav9n-4-201ENSMUST00000103626 595 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Sox1P53783 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Sox1P53783 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sox1P53783 Gm4853-201ENSMUST00000119359 394 ntBASIC8.39□□□□□ -1.07
Sox1P53783 Gm15780-201ENSMUST00000121283 935 ntBASIC8.39□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms