Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm5776-201ENSMUST00000122119 321 ntBASIC6.17□□□□□ -1.42
Sdc1P18828 Banf2os-201ENSMUST00000124061 771 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sdc1P18828 4930438E09Rik-201ENSMUST00000176841 776 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sdc1P18828 Gm4651-201ENSMUST00000181738 1283 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sdc1P18828 Gm18301-201ENSMUST00000185261 888 ntBASIC6.17□□□□□ -1.42
Sdc1P18828 Cdk2ap1-205ENSMUST00000196910 483 ntAPPRIS ALT1 TSL 2 BASIC6.17□□□□□ -1.42
Sdc1P18828 Gm44471-201ENSMUST00000197963 100 ntBASIC6.17□□□□□ -1.42
Sdc1P18828 Gm42538-202ENSMUST00000199431 358 ntTSL 3 BASIC6.17□□□□□ -1.42
Sdc1P18828 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC6.17□□□□□ -1.42
Sdc1P18828 Gm45432-201ENSMUST00000210391 416 ntBASIC6.17□□□□□ -1.42
Sdc1P18828 Gm45436-201ENSMUST00000210729 469 ntTSL 5 BASIC6.17□□□□□ -1.42
Sdc1P18828 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC6.17□□□□□ -1.42
Sdc1P18828 Olfr692-202ENSMUST00000217827 1126 ntBASIC6.17□□□□□ -1.42
Sdc1P18828 Gm8960-201ENSMUST00000219787 788 ntBASIC6.17□□□□□ -1.42
Sdc1P18828 AC120406.1-201ENSMUST00000220362 482 ntBASIC6.17□□□□□ -1.42
Sdc1P18828 AC142227.1-201ENSMUST00000221371 621 ntTSL 5 BASIC6.17□□□□□ -1.42
Sdc1P18828 AC132881.1-201ENSMUST00000223780 1062 ntBASIC6.17□□□□□ -1.42
Sdc1P18828 Npy-201ENSMUST00000031843 566 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sdc1P18828 Dcpp1-201ENSMUST00000068580 617 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Sdc1P18828 Mir326-201ENSMUST00000083637 95 ntBASIC6.17□□□□□ -1.42
Sdc1P18828 Gm10335-201ENSMUST00000096020 468 ntBASIC6.17□□□□□ -1.42
Sdc1P18828 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Sdc1P18828 Gm10132-201ENSMUST00000099431 468 ntBASIC6.17□□□□□ -1.42
Sdc1P18828 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Sdc1P18828 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Sdc1P18828 Gm8276-201ENSMUST00000192231 1812 ntBASIC6.17□□□□□ -1.42
Sdc1P18828 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sdc1P18828 AC126549.1-201ENSMUST00000225044 3687 ntBASIC6.17□□□□□ -1.42
Sdc1P18828 Ube3c-204ENSMUST00000199032 3171 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sdc1P18828 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Sdc1P18828 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Sdc1P18828 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sdc1P18828 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sdc1P18828 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sdc1P18828 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Sdc1P18828 Gm43422-201ENSMUST00000199780 3571 ntBASIC6.17□□□□□ -1.42
Sdc1P18828 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Sdc1P18828 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC6.17□□□□□ -1.42
Sdc1P18828 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Sdc1P18828 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sdc1P18828 Gm43869-201ENSMUST00000204742 1405 ntBASIC6.16□□□□□ -1.42
Sdc1P18828 Gm4275-205ENSMUST00000212624 1436 ntBASIC6.16□□□□□ -1.42
Sdc1P18828 Gm12021-201ENSMUST00000121061 1746 ntBASIC6.16□□□□□ -1.42
Sdc1P18828 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sdc1P18828 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC6.16□□□□□ -1.42
Sdc1P18828 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sdc1P18828 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sdc1P18828 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC6.16□□□□□ -1.42
Sdc1P18828 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC6.16□□□□□ -1.42
Sdc1P18828 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sdc1P18828 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Sdc1P18828 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Sdc1P18828 Gm37744-201ENSMUST00000194616 1590 ntBASIC6.16□□□□□ -1.42
Sdc1P18828 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sdc1P18828 Gm26575-201ENSMUST00000181714 2232 ntBASIC6.16□□□□□ -1.42
Sdc1P18828 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sdc1P18828 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC6.16□□□□□ -1.42
Sdc1P18828 Gm14336-201ENSMUST00000117491 475 ntBASIC6.16□□□□□ -1.42
Sdc1P18828 Gm12024-201ENSMUST00000118819 1253 ntBASIC6.16□□□□□ -1.42
Sdc1P18828 Gm11922-201ENSMUST00000118967 475 ntBASIC6.16□□□□□ -1.42
Sdc1P18828 Gm14686-201ENSMUST00000119926 343 ntBASIC6.16□□□□□ -1.42
Sdc1P18828 Gm12692-201ENSMUST00000121092 546 ntBASIC6.16□□□□□ -1.42
Sdc1P18828 Gm14826-201ENSMUST00000121284 901 ntBASIC6.16□□□□□ -1.42
Sdc1P18828 Gm12518-201ENSMUST00000122075 779 ntBASIC6.16□□□□□ -1.42
Sdc1P18828 Pip5k1bos-201ENSMUST00000126936 684 ntTSL 3 BASIC6.16□□□□□ -1.42
Sdc1P18828 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC6.16□□□□□ -1.42
Sdc1P18828 Crem-218ENSMUST00000139537 807 ntTSL 2 BASIC6.16□□□□□ -1.42
Sdc1P18828 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Sdc1P18828 Gm43518-201ENSMUST00000166129 650 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Sdc1P18828 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Sdc1P18828 Gm9286-201ENSMUST00000173586 508 ntBASIC6.16□□□□□ -1.42
Sdc1P18828 Gm3147-201ENSMUST00000180178 1221 ntTSL 5 BASIC6.16□□□□□ -1.42
Sdc1P18828 Gm10424-201ENSMUST00000180232 1221 ntTSL 5 BASIC6.16□□□□□ -1.42
Sdc1P18828 Gm26784-201ENSMUST00000181666 410 ntBASIC6.16□□□□□ -1.42
Sdc1P18828 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sdc1P18828 Gm5845-201ENSMUST00000195812 796 ntBASIC6.16□□□□□ -1.42
Sdc1P18828 Gm9729-201ENSMUST00000196364 265 ntBASIC6.16□□□□□ -1.42
Sdc1P18828 BB187690-201ENSMUST00000198619 1176 ntBASIC6.16□□□□□ -1.42
Sdc1P18828 Gm9523-201ENSMUST00000199146 1159 ntBASIC6.16□□□□□ -1.42
Sdc1P18828 Gm43106-201ENSMUST00000199485 637 ntBASIC6.16□□□□□ -1.42
Sdc1P18828 Gm18118-201ENSMUST00000201064 645 ntBASIC6.16□□□□□ -1.42
Sdc1P18828 B230311B06Rik-202ENSMUST00000207610 687 ntTSL 3 BASIC6.16□□□□□ -1.42
Sdc1P18828 Gm45782-201ENSMUST00000212670 366 ntBASIC6.16□□□□□ -1.42
Sdc1P18828 AC137117.2-201ENSMUST00000228560 282 ntBASIC6.16□□□□□ -1.42
Sdc1P18828 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC6.16□□□□□ -1.42
Sdc1P18828 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sdc1P18828 Gm6457-201ENSMUST00000066378 815 ntBASIC6.16□□□□□ -1.42
Sdc1P18828 Gm24145-201ENSMUST00000082631 163 ntBASIC6.16□□□□□ -1.42
Sdc1P18828 Snora74a-201ENSMUST00000083715 196 ntBASIC6.16□□□□□ -1.42
Sdc1P18828 Gm24696-201ENSMUST00000083878 134 ntBASIC6.16□□□□□ -1.42
Sdc1P18828 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sdc1P18828 Gm6418-201ENSMUST00000118325 3577 ntBASIC6.16□□□□□ -1.42
Sdc1P18828 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Sdc1P18828 CT025619.3-201ENSMUST00000216299 3267 ntBASIC6.16□□□□□ -1.42
Sdc1P18828 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Sdc1P18828 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC6.16□□□□□ -1.42
Sdc1P18828 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sdc1P18828 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sdc1P18828 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sdc1P18828 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms