Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Cd37-208ENSMUST00000210372 960 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Col6a3E9PWQ3 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC7.39□□□□□ -1.23
Col6a3E9PWQ3 CT009495.1-201ENSMUST00000224221 862 ntBASIC7.39□□□□□ -1.23
Col6a3E9PWQ3 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col6a3E9PWQ3 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col6a3E9PWQ3 Gm45873-201ENSMUST00000211865 1915 ntBASIC7.39□□□□□ -1.23
Col6a3E9PWQ3 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Gm42907-201ENSMUST00000199793 2148 ntBASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Pax9-201ENSMUST00000001538 4166 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Erc1-203ENSMUST00000183703 8760 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Gm14775-201ENSMUST00000122089 310 ntBASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Gm17366-201ENSMUST00000167629 187 ntBASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 AC121542.2-201ENSMUST00000227529 400 ntBASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Asb17-201ENSMUST00000044089 2553 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 AC187103.1-201ENSMUST00000224641 1475 ntBASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Gm45289-201ENSMUST00000211048 2577 ntBASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Gm36938-201ENSMUST00000191612 2696 ntBASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Eci2-213ENSMUST00000178421 1414 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Gm6977-201ENSMUST00000121568 512 ntBASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Gm29354-201ENSMUST00000187613 696 ntBASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Gm43725-201ENSMUST00000200122 369 ntBASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Gm43850-201ENSMUST00000202021 578 ntBASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 AC134537.2-201ENSMUST00000217770 575 ntBASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Gm18040-201ENSMUST00000217922 827 ntBASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Gm44437-201ENSMUST00000203832 4038 ntBASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Syne1-202ENSMUST00000095899 3443 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Foxp3-202ENSMUST00000115738 3681 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 BC049715-203ENSMUST00000203499 2057 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Col6a3E9PWQ3 Lingo2-204ENSMUST00000108124 2414 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Gm7265-201ENSMUST00000192735 3502 ntBASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Gm43910-201ENSMUST00000204561 3241 ntBASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Gm22774-201ENSMUST00000102084 109 ntBASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Gm13033-201ENSMUST00000117591 1057 ntBASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Rpl37rt-202ENSMUST00000124641 294 ntBASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Dnajc5b-204ENSMUST00000165693 955 ntAPPRIS P1 TSL 3 BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Gm9320-201ENSMUST00000184151 473 ntBASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 AV026068-219ENSMUST00000224148 933 ntBASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Gm38244-201ENSMUST00000191737 2586 ntBASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Rabl3-201ENSMUST00000023524 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Gm8464-201ENSMUST00000140208 2200 ntBASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Gm4750-202ENSMUST00000152262 2200 ntBASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 B930018H19Rik-201ENSMUST00000211381 2121 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 C5ar2-201ENSMUST00000098792 3429 ntAPPRIS P5 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Wee2-201ENSMUST00000038907 2884 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Celf2-221ENSMUST00000182706 2525 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Dgcr2-204ENSMUST00000117945 4003 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Gm6446-201ENSMUST00000120604 818 ntBASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Gm25904-201ENSMUST00000158491 143 ntBASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC7.37□□□□□ -1.23
Col6a3E9PWQ3 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms