Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Speer3W4VSP1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Speer3W4VSP1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Speer3W4VSP1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Speer3W4VSP1 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Speer3W4VSP1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Speer3W4VSP1 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC18.86■□□□□ 0.61
Speer3W4VSP1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Speer3W4VSP1 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Speer3W4VSP1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Speer3W4VSP1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Speer3W4VSP1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Speer3W4VSP1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Speer3W4VSP1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Speer3W4VSP1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Speer3W4VSP1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Speer3W4VSP1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Speer3W4VSP1 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.85■□□□□ 0.61
Speer3W4VSP1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Speer3W4VSP1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.85■□□□□ 0.61
Speer3W4VSP1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Speer3W4VSP1 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Speer3W4VSP1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Speer3W4VSP1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.85■□□□□ 0.61
Speer3W4VSP1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Speer3W4VSP1 Gm12251-201ENSMUST00000117893 792 ntBASIC18.85■□□□□ 0.61
Speer3W4VSP1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.85■□□□□ 0.61
Speer3W4VSP1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.85■□□□□ 0.61
Speer3W4VSP1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Speer3W4VSP1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Speer3W4VSP1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Speer3W4VSP1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Speer3W4VSP1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.85■□□□□ 0.61
Speer3W4VSP1 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Speer3W4VSP1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Speer3W4VSP1 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Speer3W4VSP1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Speer3W4VSP1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Speer3W4VSP1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Speer3W4VSP1 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Speer3W4VSP1 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Speer3W4VSP1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Speer3W4VSP1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Speer3W4VSP1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Speer3W4VSP1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.84■□□□□ 0.61
Speer3W4VSP1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.84■□□□□ 0.61
Speer3W4VSP1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Speer3W4VSP1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Speer3W4VSP1 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Speer3W4VSP1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Speer3W4VSP1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Speer3W4VSP1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Speer3W4VSP1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.84■□□□□ 0.61
Speer3W4VSP1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Speer3W4VSP1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Speer3W4VSP1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Speer3W4VSP1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Speer3W4VSP1 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.83■□□□□ 0.61
Speer3W4VSP1 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Speer3W4VSP1 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Speer3W4VSP1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Speer3W4VSP1 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Speer3W4VSP1 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Speer3W4VSP1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.83■□□□□ 0.6
Speer3W4VSP1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Speer3W4VSP1 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Speer3W4VSP1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.83■□□□□ 0.6
Speer3W4VSP1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Speer3W4VSP1 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.83■□□□□ 0.6
Speer3W4VSP1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Speer3W4VSP1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Speer3W4VSP1 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Speer3W4VSP1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Speer3W4VSP1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Speer3W4VSP1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Speer3W4VSP1 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Speer3W4VSP1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Speer3W4VSP1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Speer3W4VSP1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Speer3W4VSP1 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Speer3W4VSP1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Speer3W4VSP1 Gm11421-201ENSMUST00000122124 294 ntBASIC18.82■□□□□ 0.6
Speer3W4VSP1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Speer3W4VSP1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.82■□□□□ 0.6
Speer3W4VSP1 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.82■□□□□ 0.6
Speer3W4VSP1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Speer3W4VSP1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Speer3W4VSP1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Speer3W4VSP1 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Speer3W4VSP1 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Speer3W4VSP1 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Speer3W4VSP1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Speer3W4VSP1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Speer3W4VSP1 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Speer3W4VSP1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Speer3W4VSP1 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.81■□□□□ 0.6
Speer3W4VSP1 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Speer3W4VSP1 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Speer3W4VSP1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Speer3W4VSP1 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms