Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
H2afb2S4R1M3 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
H2afb2S4R1M3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
H2afb2S4R1M3 Gm13534-201ENSMUST00000121169 513 ntBASIC18.62■□□□□ 0.57
H2afb2S4R1M3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
H2afb2S4R1M3 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.62■□□□□ 0.57
H2afb2S4R1M3 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
H2afb2S4R1M3 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.62■□□□□ 0.57
H2afb2S4R1M3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
H2afb2S4R1M3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
H2afb2S4R1M3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.62■□□□□ 0.57
H2afb2S4R1M3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.62■□□□□ 0.57
H2afb2S4R1M3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
H2afb2S4R1M3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
H2afb2S4R1M3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
H2afb2S4R1M3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
H2afb2S4R1M3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
H2afb2S4R1M3 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
H2afb2S4R1M3 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
H2afb2S4R1M3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
H2afb2S4R1M3 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
H2afb2S4R1M3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
H2afb2S4R1M3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
H2afb2S4R1M3 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.61■□□□□ 0.57
H2afb2S4R1M3 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
H2afb2S4R1M3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.61■□□□□ 0.57
H2afb2S4R1M3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
H2afb2S4R1M3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
H2afb2S4R1M3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
H2afb2S4R1M3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
H2afb2S4R1M3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.61■□□□□ 0.57
H2afb2S4R1M3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
H2afb2S4R1M3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
H2afb2S4R1M3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
H2afb2S4R1M3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.6■□□□□ 0.57
H2afb2S4R1M3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
H2afb2S4R1M3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.6■□□□□ 0.57
H2afb2S4R1M3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
H2afb2S4R1M3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
H2afb2S4R1M3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.6■□□□□ 0.57
H2afb2S4R1M3 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
H2afb2S4R1M3 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
H2afb2S4R1M3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.6■□□□□ 0.57
H2afb2S4R1M3 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
H2afb2S4R1M3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
H2afb2S4R1M3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
H2afb2S4R1M3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
H2afb2S4R1M3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.59■□□□□ 0.57
H2afb2S4R1M3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
H2afb2S4R1M3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
H2afb2S4R1M3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
H2afb2S4R1M3 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
H2afb2S4R1M3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
H2afb2S4R1M3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
H2afb2S4R1M3 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.59■□□□□ 0.57
H2afb2S4R1M3 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
H2afb2S4R1M3 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.59■□□□□ 0.57
H2afb2S4R1M3 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
H2afb2S4R1M3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
H2afb2S4R1M3 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
H2afb2S4R1M3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
H2afb2S4R1M3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
H2afb2S4R1M3 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
H2afb2S4R1M3 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
H2afb2S4R1M3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
H2afb2S4R1M3 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.58■□□□□ 0.56
H2afb2S4R1M3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
H2afb2S4R1M3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
H2afb2S4R1M3 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
H2afb2S4R1M3 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
H2afb2S4R1M3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
H2afb2S4R1M3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
H2afb2S4R1M3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
H2afb2S4R1M3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
H2afb2S4R1M3 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
H2afb2S4R1M3 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.57■□□□□ 0.56
H2afb2S4R1M3 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
H2afb2S4R1M3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
H2afb2S4R1M3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
H2afb2S4R1M3 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
H2afb2S4R1M3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2afb2S4R1M3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2afb2S4R1M3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2afb2S4R1M3 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
H2afb2S4R1M3 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2afb2S4R1M3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
H2afb2S4R1M3 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.56■□□□□ 0.56
H2afb2S4R1M3 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2afb2S4R1M3 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2afb2S4R1M3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2afb2S4R1M3 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
H2afb2S4R1M3 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
H2afb2S4R1M3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
H2afb2S4R1M3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
H2afb2S4R1M3 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2afb2S4R1M3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
H2afb2S4R1M3 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
H2afb2S4R1M3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
H2afb2S4R1M3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2afb2S4R1M3 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms