Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
H2afb3S4R1G7 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
H2afb3S4R1G7 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
H2afb3S4R1G7 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
H2afb3S4R1G7 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
H2afb3S4R1G7 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
H2afb3S4R1G7 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
H2afb3S4R1G7 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.71■□□□□ 0.27
H2afb3S4R1G7 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
H2afb3S4R1G7 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
H2afb3S4R1G7 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
H2afb3S4R1G7 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
H2afb3S4R1G7 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb3S4R1G7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb3S4R1G7 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb3S4R1G7 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb3S4R1G7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
H2afb3S4R1G7 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb3S4R1G7 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb3S4R1G7 Gm27454-201ENSMUST00000185090 204 ntBASIC16.7■□□□□ 0.26
H2afb3S4R1G7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.7■□□□□ 0.26
H2afb3S4R1G7 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb3S4R1G7 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
H2afb3S4R1G7 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
H2afb3S4R1G7 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb3S4R1G7 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb3S4R1G7 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb3S4R1G7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb3S4R1G7 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2afb3S4R1G7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2afb3S4R1G7 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2afb3S4R1G7 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.69■□□□□ 0.26
H2afb3S4R1G7 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2afb3S4R1G7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2afb3S4R1G7 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2afb3S4R1G7 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2afb3S4R1G7 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2afb3S4R1G7 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
H2afb3S4R1G7 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
H2afb3S4R1G7 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2afb3S4R1G7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2afb3S4R1G7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2afb3S4R1G7 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
H2afb3S4R1G7 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.68■□□□□ 0.26
H2afb3S4R1G7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2afb3S4R1G7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2afb3S4R1G7 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.68■□□□□ 0.26
H2afb3S4R1G7 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2afb3S4R1G7 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.68■□□□□ 0.26
H2afb3S4R1G7 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
H2afb3S4R1G7 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
H2afb3S4R1G7 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2afb3S4R1G7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2afb3S4R1G7 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2afb3S4R1G7 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2afb3S4R1G7 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
H2afb3S4R1G7 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2afb3S4R1G7 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2afb3S4R1G7 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2afb3S4R1G7 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2afb3S4R1G7 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2afb3S4R1G7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2afb3S4R1G7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2afb3S4R1G7 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2afb3S4R1G7 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2afb3S4R1G7 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2afb3S4R1G7 Gm26833-201ENSMUST00000180899 440 ntBASIC16.67■□□□□ 0.26
H2afb3S4R1G7 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2afb3S4R1G7 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2afb3S4R1G7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
H2afb3S4R1G7 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.66■□□□□ 0.26
H2afb3S4R1G7 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
H2afb3S4R1G7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
H2afb3S4R1G7 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
H2afb3S4R1G7 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
H2afb3S4R1G7 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.66■□□□□ 0.26
H2afb3S4R1G7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
H2afb3S4R1G7 Gm6139-201ENSMUST00000079261 882 ntBASIC16.66■□□□□ 0.26
H2afb3S4R1G7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
H2afb3S4R1G7 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
H2afb3S4R1G7 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
H2afb3S4R1G7 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
H2afb3S4R1G7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.66■□□□□ 0.26
H2afb3S4R1G7 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.65■□□□□ 0.26
H2afb3S4R1G7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
H2afb3S4R1G7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H2afb3S4R1G7 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.65■□□□□ 0.26
H2afb3S4R1G7 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H2afb3S4R1G7 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H2afb3S4R1G7 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
H2afb3S4R1G7 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.65■□□□□ 0.26
H2afb3S4R1G7 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
H2afb3S4R1G7 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H2afb3S4R1G7 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H2afb3S4R1G7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H2afb3S4R1G7 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
H2afb3S4R1G7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H2afb3S4R1G7 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H2afb3S4R1G7 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
H2afb3S4R1G7 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms