Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Nespas-201ENSMUST00000143738 1083 ntBASIC17.06■□□□□ 0.32
Phf1Q9Z1B8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Phf1Q9Z1B8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Phf1Q9Z1B8 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.06■□□□□ 0.32
Phf1Q9Z1B8 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Phf1Q9Z1B8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Phf1Q9Z1B8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Phf1Q9Z1B8 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Phf1Q9Z1B8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Phf1Q9Z1B8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Phf1Q9Z1B8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Phf1Q9Z1B8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Phf1Q9Z1B8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Phf1Q9Z1B8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Phf1Q9Z1B8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Phf1Q9Z1B8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Phf1Q9Z1B8 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Phf1Q9Z1B8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Phf1Q9Z1B8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.05■□□□□ 0.32
Phf1Q9Z1B8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Phf1Q9Z1B8 Gm13148-201ENSMUST00000118892 745 ntBASIC17.05■□□□□ 0.32
Phf1Q9Z1B8 Mir5133-201ENSMUST00000174955 77 ntBASIC17.05■□□□□ 0.32
Phf1Q9Z1B8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.05■□□□□ 0.32
Phf1Q9Z1B8 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Phf1Q9Z1B8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Phf1Q9Z1B8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Phf1Q9Z1B8 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Phf1Q9Z1B8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Phf1Q9Z1B8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Phf1Q9Z1B8 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Phf1Q9Z1B8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Phf1Q9Z1B8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Phf1Q9Z1B8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Phf1Q9Z1B8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Phf1Q9Z1B8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Phf1Q9Z1B8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Phf1Q9Z1B8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Phf1Q9Z1B8 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Phf1Q9Z1B8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Phf1Q9Z1B8 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.04■□□□□ 0.32
Phf1Q9Z1B8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Phf1Q9Z1B8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.04■□□□□ 0.32
Phf1Q9Z1B8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Phf1Q9Z1B8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Phf1Q9Z1B8 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Phf1Q9Z1B8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.04■□□□□ 0.32
Phf1Q9Z1B8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Phf1Q9Z1B8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Phf1Q9Z1B8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Phf1Q9Z1B8 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.04■□□□□ 0.32
Phf1Q9Z1B8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Phf1Q9Z1B8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Phf1Q9Z1B8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Phf1Q9Z1B8 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Phf1Q9Z1B8 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Phf1Q9Z1B8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Phf1Q9Z1B8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Phf1Q9Z1B8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Phf1Q9Z1B8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Phf1Q9Z1B8 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Phf1Q9Z1B8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Phf1Q9Z1B8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.03■□□□□ 0.32
Phf1Q9Z1B8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.03■□□□□ 0.32
Phf1Q9Z1B8 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Phf1Q9Z1B8 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.03■□□□□ 0.32
Phf1Q9Z1B8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Phf1Q9Z1B8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Phf1Q9Z1B8 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Phf1Q9Z1B8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Phf1Q9Z1B8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Phf1Q9Z1B8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Phf1Q9Z1B8 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.03■□□□□ 0.32
Phf1Q9Z1B8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Phf1Q9Z1B8 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Phf1Q9Z1B8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Phf1Q9Z1B8 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.02■□□□□ 0.32
Phf1Q9Z1B8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Phf1Q9Z1B8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Phf1Q9Z1B8 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Phf1Q9Z1B8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Phf1Q9Z1B8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Phf1Q9Z1B8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Phf1Q9Z1B8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Phf1Q9Z1B8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Phf1Q9Z1B8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Phf1Q9Z1B8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Phf1Q9Z1B8 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Phf1Q9Z1B8 Gm12441-201ENSMUST00000121806 588 ntBASIC17.01■□□□□ 0.31
Phf1Q9Z1B8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.01■□□□□ 0.31
Phf1Q9Z1B8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Phf1Q9Z1B8 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Phf1Q9Z1B8 Gm6365-201ENSMUST00000054711 744 ntBASIC17.01■□□□□ 0.31
Phf1Q9Z1B8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Phf1Q9Z1B8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Phf1Q9Z1B8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Phf1Q9Z1B8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Phf1Q9Z1B8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Phf1Q9Z1B8 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Phf1Q9Z1B8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Phf1Q9Z1B8 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms