Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Gm13146-201ENSMUST00000118508 780 ntBASIC17.91■□□□□ 0.46
Cldn9Q9Z0S7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Cldn9Q9Z0S7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Cldn9Q9Z0S7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.91■□□□□ 0.46
Cldn9Q9Z0S7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn9Q9Z0S7 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Cldn9Q9Z0S7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn9Q9Z0S7 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn9Q9Z0S7 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.91■□□□□ 0.46
Cldn9Q9Z0S7 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.91■□□□□ 0.46
Cldn9Q9Z0S7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.91■□□□□ 0.46
Cldn9Q9Z0S7 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.91■□□□□ 0.46
Cldn9Q9Z0S7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn9Q9Z0S7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn9Q9Z0S7 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Cldn9Q9Z0S7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn9Q9Z0S7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn9Q9Z0S7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Cldn9Q9Z0S7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn9Q9Z0S7 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn9Q9Z0S7 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn9Q9Z0S7 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn9Q9Z0S7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cldn9Q9Z0S7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn9Q9Z0S7 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn9Q9Z0S7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn9Q9Z0S7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn9Q9Z0S7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn9Q9Z0S7 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn9Q9Z0S7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn9Q9Z0S7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn9Q9Z0S7 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn9Q9Z0S7 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn9Q9Z0S7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldn9Q9Z0S7 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cldn9Q9Z0S7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Cldn9Q9Z0S7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldn9Q9Z0S7 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldn9Q9Z0S7 Gm13234-201ENSMUST00000120010 747 ntBASIC17.88■□□□□ 0.45
Cldn9Q9Z0S7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Cldn9Q9Z0S7 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Cldn9Q9Z0S7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.88■□□□□ 0.45
Cldn9Q9Z0S7 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.88■□□□□ 0.45
Cldn9Q9Z0S7 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.88■□□□□ 0.45
Cldn9Q9Z0S7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cldn9Q9Z0S7 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Cldn9Q9Z0S7 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldn9Q9Z0S7 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldn9Q9Z0S7 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldn9Q9Z0S7 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Cldn9Q9Z0S7 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldn9Q9Z0S7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.87■□□□□ 0.45
Cldn9Q9Z0S7 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.87■□□□□ 0.45
Cldn9Q9Z0S7 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldn9Q9Z0S7 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.87■□□□□ 0.45
Cldn9Q9Z0S7 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Cldn9Q9Z0S7 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldn9Q9Z0S7 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cldn9Q9Z0S7 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cldn9Q9Z0S7 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Cldn9Q9Z0S7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.87■□□□□ 0.45
Cldn9Q9Z0S7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Cldn9Q9Z0S7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn9Q9Z0S7 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Cldn9Q9Z0S7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn9Q9Z0S7 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn9Q9Z0S7 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn9Q9Z0S7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn9Q9Z0S7 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn9Q9Z0S7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.86■□□□□ 0.45
Cldn9Q9Z0S7 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Cldn9Q9Z0S7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn9Q9Z0S7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn9Q9Z0S7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.86■□□□□ 0.45
Cldn9Q9Z0S7 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn9Q9Z0S7 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Cldn9Q9Z0S7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Cldn9Q9Z0S7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn9Q9Z0S7 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cldn9Q9Z0S7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Cldn9Q9Z0S7 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cldn9Q9Z0S7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cldn9Q9Z0S7 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cldn9Q9Z0S7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cldn9Q9Z0S7 Gm42778-201ENSMUST00000199644 553 ntBASIC17.85■□□□□ 0.45
Cldn9Q9Z0S7 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
Cldn9Q9Z0S7 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cldn9Q9Z0S7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cldn9Q9Z0S7 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cldn9Q9Z0S7 Gm10493-201ENSMUST00000097270 612 ntBASIC17.85■□□□□ 0.45
Cldn9Q9Z0S7 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cldn9Q9Z0S7 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn9Q9Z0S7 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn9Q9Z0S7 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Cldn9Q9Z0S7 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Cldn9Q9Z0S7 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn9Q9Z0S7 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn9Q9Z0S7 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.84■□□□□ 0.45
Cldn9Q9Z0S7 Gm13534-201ENSMUST00000121169 513 ntBASIC17.84■□□□□ 0.45
Cldn9Q9Z0S7 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms