Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CcsQ9WU84 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CcsQ9WU84 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.39□□□□□ -0.11
CcsQ9WU84 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CcsQ9WU84 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CcsQ9WU84 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC14.39□□□□□ -0.11
CcsQ9WU84 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CcsQ9WU84 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CcsQ9WU84 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CcsQ9WU84 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CcsQ9WU84 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CcsQ9WU84 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CcsQ9WU84 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CcsQ9WU84 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CcsQ9WU84 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CcsQ9WU84 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.39□□□□□ -0.11
CcsQ9WU84 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CcsQ9WU84 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CcsQ9WU84 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CcsQ9WU84 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
CcsQ9WU84 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CcsQ9WU84 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CcsQ9WU84 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC14.38□□□□□ -0.11
CcsQ9WU84 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CcsQ9WU84 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CcsQ9WU84 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CcsQ9WU84 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CcsQ9WU84 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC14.38□□□□□ -0.11
CcsQ9WU84 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
CcsQ9WU84 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CcsQ9WU84 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CcsQ9WU84 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CcsQ9WU84 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CcsQ9WU84 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CcsQ9WU84 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CcsQ9WU84 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CcsQ9WU84 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CcsQ9WU84 Gm10657-201ENSMUST00000193528 1031 ntBASIC14.37□□□□□ -0.11
CcsQ9WU84 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CcsQ9WU84 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.37□□□□□ -0.11
CcsQ9WU84 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.37□□□□□ -0.11
CcsQ9WU84 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CcsQ9WU84 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CcsQ9WU84 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CcsQ9WU84 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CcsQ9WU84 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CcsQ9WU84 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CcsQ9WU84 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CcsQ9WU84 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CcsQ9WU84 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CcsQ9WU84 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CcsQ9WU84 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CcsQ9WU84 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CcsQ9WU84 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CcsQ9WU84 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CcsQ9WU84 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.36□□□□□ -0.11
CcsQ9WU84 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.36□□□□□ -0.11
CcsQ9WU84 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CcsQ9WU84 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CcsQ9WU84 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CcsQ9WU84 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CcsQ9WU84 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CcsQ9WU84 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CcsQ9WU84 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CcsQ9WU84 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CcsQ9WU84 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CcsQ9WU84 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CcsQ9WU84 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CcsQ9WU84 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CcsQ9WU84 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CcsQ9WU84 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CcsQ9WU84 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.35□□□□□ -0.11
CcsQ9WU84 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.35□□□□□ -0.11
CcsQ9WU84 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CcsQ9WU84 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CcsQ9WU84 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CcsQ9WU84 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CcsQ9WU84 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CcsQ9WU84 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CcsQ9WU84 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC14.35□□□□□ -0.11
CcsQ9WU84 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CcsQ9WU84 Krt8-ps-201ENSMUST00000208495 945 ntBASIC14.35□□□□□ -0.11
CcsQ9WU84 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.35□□□□□ -0.11
CcsQ9WU84 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CcsQ9WU84 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CcsQ9WU84 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CcsQ9WU84 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CcsQ9WU84 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CcsQ9WU84 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CcsQ9WU84 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.35□□□□□ -0.11
CcsQ9WU84 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.35□□□□□ -0.11
CcsQ9WU84 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CcsQ9WU84 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CcsQ9WU84 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CcsQ9WU84 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CcsQ9WU84 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CcsQ9WU84 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CcsQ9WU84 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CcsQ9WU84 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC14.34□□□□□ -0.11
CcsQ9WU84 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms