Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RpgrQ9R0X5 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RpgrQ9R0X5 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RpgrQ9R0X5 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RpgrQ9R0X5 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
RpgrQ9R0X5 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RpgrQ9R0X5 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.82■□□□□ 0.6
RpgrQ9R0X5 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RpgrQ9R0X5 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.82■□□□□ 0.6
RpgrQ9R0X5 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RpgrQ9R0X5 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.82■□□□□ 0.6
RpgrQ9R0X5 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RpgrQ9R0X5 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RpgrQ9R0X5 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RpgrQ9R0X5 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RpgrQ9R0X5 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RpgrQ9R0X5 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.82■□□□□ 0.6
RpgrQ9R0X5 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RpgrQ9R0X5 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RpgrQ9R0X5 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.81■□□□□ 0.6
RpgrQ9R0X5 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RpgrQ9R0X5 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.81■□□□□ 0.6
RpgrQ9R0X5 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RpgrQ9R0X5 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RpgrQ9R0X5 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RpgrQ9R0X5 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RpgrQ9R0X5 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RpgrQ9R0X5 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.81■□□□□ 0.6
RpgrQ9R0X5 Grk6-206ENSMUST00000224995 2971 ntBASIC18.81■□□□□ 0.6
RpgrQ9R0X5 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RpgrQ9R0X5 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.81■□□□□ 0.6
RpgrQ9R0X5 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RpgrQ9R0X5 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RpgrQ9R0X5 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RpgrQ9R0X5 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RpgrQ9R0X5 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.8■□□□□ 0.6
RpgrQ9R0X5 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RpgrQ9R0X5 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RpgrQ9R0X5 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
RpgrQ9R0X5 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RpgrQ9R0X5 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RpgrQ9R0X5 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RpgrQ9R0X5 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RpgrQ9R0X5 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.8■□□□□ 0.6
RpgrQ9R0X5 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.8■□□□□ 0.6
RpgrQ9R0X5 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RpgrQ9R0X5 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RpgrQ9R0X5 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RpgrQ9R0X5 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.79■□□□□ 0.6
RpgrQ9R0X5 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RpgrQ9R0X5 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RpgrQ9R0X5 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
RpgrQ9R0X5 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.79■□□□□ 0.6
RpgrQ9R0X5 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RpgrQ9R0X5 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
RpgrQ9R0X5 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RpgrQ9R0X5 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RpgrQ9R0X5 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RpgrQ9R0X5 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RpgrQ9R0X5 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RpgrQ9R0X5 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RpgrQ9R0X5 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RpgrQ9R0X5 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RpgrQ9R0X5 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RpgrQ9R0X5 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RpgrQ9R0X5 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RpgrQ9R0X5 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RpgrQ9R0X5 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RpgrQ9R0X5 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RpgrQ9R0X5 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RpgrQ9R0X5 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RpgrQ9R0X5 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RpgrQ9R0X5 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RpgrQ9R0X5 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RpgrQ9R0X5 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.77■□□□□ 0.6
RpgrQ9R0X5 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.77■□□□□ 0.6
RpgrQ9R0X5 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
RpgrQ9R0X5 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RpgrQ9R0X5 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.77■□□□□ 0.6
RpgrQ9R0X5 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RpgrQ9R0X5 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RpgrQ9R0X5 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RpgrQ9R0X5 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RpgrQ9R0X5 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RpgrQ9R0X5 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RpgrQ9R0X5 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
RpgrQ9R0X5 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.59
RpgrQ9R0X5 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
RpgrQ9R0X5 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RpgrQ9R0X5 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RpgrQ9R0X5 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RpgrQ9R0X5 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.76■□□□□ 0.59
RpgrQ9R0X5 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.76■□□□□ 0.59
RpgrQ9R0X5 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RpgrQ9R0X5 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RpgrQ9R0X5 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RpgrQ9R0X5 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.76■□□□□ 0.59
RpgrQ9R0X5 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.76■□□□□ 0.59
RpgrQ9R0X5 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RpgrQ9R0X5 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms