Protein–RNA interactions for Protein: Q9R0A5

Nek3, Serine/threonine-protein kinase Nek3, mousemouse

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek3Q9R0A5 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.39■□□□□ 0.85
Nek3Q9R0A5 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nek3Q9R0A5 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nek3Q9R0A5 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.39■□□□□ 0.85
Nek3Q9R0A5 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nek3Q9R0A5 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nek3Q9R0A5 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nek3Q9R0A5 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.39■□□□□ 0.85
Nek3Q9R0A5 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nek3Q9R0A5 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nek3Q9R0A5 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nek3Q9R0A5 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nek3Q9R0A5 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.38■□□□□ 0.85
Nek3Q9R0A5 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nek3Q9R0A5 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Nek3Q9R0A5 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.38■□□□□ 0.85
Nek3Q9R0A5 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nek3Q9R0A5 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nek3Q9R0A5 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Nek3Q9R0A5 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Nek3Q9R0A5 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.38■□□□□ 0.85
Nek3Q9R0A5 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nek3Q9R0A5 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.38■□□□□ 0.85
Nek3Q9R0A5 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nek3Q9R0A5 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nek3Q9R0A5 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nek3Q9R0A5 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nek3Q9R0A5 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.37■□□□□ 0.85
Nek3Q9R0A5 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nek3Q9R0A5 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nek3Q9R0A5 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.37■□□□□ 0.85
Nek3Q9R0A5 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.37■□□□□ 0.85
Nek3Q9R0A5 Gm21956-201ENSMUST00000179946 522 ntBASIC20.37■□□□□ 0.85
Nek3Q9R0A5 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nek3Q9R0A5 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Nek3Q9R0A5 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nek3Q9R0A5 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nek3Q9R0A5 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nek3Q9R0A5 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.36■□□□□ 0.85
Nek3Q9R0A5 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nek3Q9R0A5 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nek3Q9R0A5 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nek3Q9R0A5 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nek3Q9R0A5 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
Nek3Q9R0A5 Mir7075-201ENSMUST00000184187 82 ntBASIC20.36■□□□□ 0.85
Nek3Q9R0A5 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.36■□□□□ 0.85
Nek3Q9R0A5 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nek3Q9R0A5 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nek3Q9R0A5 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nek3Q9R0A5 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nek3Q9R0A5 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nek3Q9R0A5 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nek3Q9R0A5 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nek3Q9R0A5 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nek3Q9R0A5 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nek3Q9R0A5 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nek3Q9R0A5 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nek3Q9R0A5 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nek3Q9R0A5 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Nek3Q9R0A5 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nek3Q9R0A5 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.35■□□□□ 0.85
Nek3Q9R0A5 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
Nek3Q9R0A5 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nek3Q9R0A5 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nek3Q9R0A5 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Nek3Q9R0A5 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nek3Q9R0A5 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nek3Q9R0A5 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nek3Q9R0A5 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nek3Q9R0A5 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nek3Q9R0A5 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nek3Q9R0A5 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.34■□□□□ 0.85
Nek3Q9R0A5 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nek3Q9R0A5 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nek3Q9R0A5 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nek3Q9R0A5 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.34■□□□□ 0.85
Nek3Q9R0A5 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nek3Q9R0A5 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.85
Nek3Q9R0A5 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nek3Q9R0A5 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nek3Q9R0A5 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.33■□□□□ 0.85
Nek3Q9R0A5 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nek3Q9R0A5 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nek3Q9R0A5 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Nek3Q9R0A5 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nek3Q9R0A5 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nek3Q9R0A5 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nek3Q9R0A5 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nek3Q9R0A5 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nek3Q9R0A5 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nek3Q9R0A5 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nek3Q9R0A5 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Nek3Q9R0A5 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.32■□□□□ 0.84
Nek3Q9R0A5 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nek3Q9R0A5 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nek3Q9R0A5 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.32■□□□□ 0.84
Nek3Q9R0A5 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nek3Q9R0A5 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.32■□□□□ 0.84
Nek3Q9R0A5 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nek3Q9R0A5 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms