Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19■□□□□ 0.63
Clcn2Q9R0A1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn2Q9R0A1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.99■□□□□ 0.63
Clcn2Q9R0A1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn2Q9R0A1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.99■□□□□ 0.63
Clcn2Q9R0A1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn2Q9R0A1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
Clcn2Q9R0A1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Clcn2Q9R0A1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn2Q9R0A1 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn2Q9R0A1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn2Q9R0A1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn2Q9R0A1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn2Q9R0A1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn2Q9R0A1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Clcn2Q9R0A1 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.98■□□□□ 0.63
Clcn2Q9R0A1 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn2Q9R0A1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn2Q9R0A1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn2Q9R0A1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Clcn2Q9R0A1 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.98■□□□□ 0.63
Clcn2Q9R0A1 Gm27801-201ENSMUST00000184174 223 ntBASIC18.98■□□□□ 0.63
Clcn2Q9R0A1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.98■□□□□ 0.63
Clcn2Q9R0A1 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.98■□□□□ 0.63
Clcn2Q9R0A1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn2Q9R0A1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn2Q9R0A1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn2Q9R0A1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn2Q9R0A1 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.98■□□□□ 0.63
Clcn2Q9R0A1 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn2Q9R0A1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn2Q9R0A1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn2Q9R0A1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn2Q9R0A1 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn2Q9R0A1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn2Q9R0A1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn2Q9R0A1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
Clcn2Q9R0A1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn2Q9R0A1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.97■□□□□ 0.63
Clcn2Q9R0A1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn2Q9R0A1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn2Q9R0A1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn2Q9R0A1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn2Q9R0A1 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.97■□□□□ 0.63
Clcn2Q9R0A1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Clcn2Q9R0A1 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Clcn2Q9R0A1 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clcn2Q9R0A1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.96■□□□□ 0.63
Clcn2Q9R0A1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Clcn2Q9R0A1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clcn2Q9R0A1 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clcn2Q9R0A1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clcn2Q9R0A1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clcn2Q9R0A1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Clcn2Q9R0A1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.95■□□□□ 0.62
Clcn2Q9R0A1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Clcn2Q9R0A1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clcn2Q9R0A1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.95■□□□□ 0.62
Clcn2Q9R0A1 Gm5874-201ENSMUST00000096101 508 ntBASIC18.95■□□□□ 0.62
Clcn2Q9R0A1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Clcn2Q9R0A1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Clcn2Q9R0A1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clcn2Q9R0A1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clcn2Q9R0A1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.94■□□□□ 0.62
Clcn2Q9R0A1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Clcn2Q9R0A1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clcn2Q9R0A1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.94■□□□□ 0.62
Clcn2Q9R0A1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clcn2Q9R0A1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.94■□□□□ 0.62
Clcn2Q9R0A1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clcn2Q9R0A1 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clcn2Q9R0A1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clcn2Q9R0A1 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn2Q9R0A1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn2Q9R0A1 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn2Q9R0A1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn2Q9R0A1 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn2Q9R0A1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.93■□□□□ 0.62
Clcn2Q9R0A1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn2Q9R0A1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.93■□□□□ 0.62
Clcn2Q9R0A1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.93■□□□□ 0.62
Clcn2Q9R0A1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn2Q9R0A1 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn2Q9R0A1 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.93■□□□□ 0.62
Clcn2Q9R0A1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn2Q9R0A1 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn2Q9R0A1 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn2Q9R0A1 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.93■□□□□ 0.62
Clcn2Q9R0A1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn2Q9R0A1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn2Q9R0A1 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn2Q9R0A1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn2Q9R0A1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn2Q9R0A1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn2Q9R0A1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn2Q9R0A1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn2Q9R0A1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn2Q9R0A1 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn2Q9R0A1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn2Q9R0A1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms