Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a4Q9QZR9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.94■□□□□ 0.62
Col4a4Q9QZR9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a4Q9QZR9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a4Q9QZR9 Gm45058-201ENSMUST00000205810 766 ntBASIC18.94■□□□□ 0.62
Col4a4Q9QZR9 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a4Q9QZR9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a4Q9QZR9 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a4Q9QZR9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a4Q9QZR9 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Col4a4Q9QZR9 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a4Q9QZR9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a4Q9QZR9 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a4Q9QZR9 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.93■□□□□ 0.62
Col4a4Q9QZR9 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Col4a4Q9QZR9 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.93■□□□□ 0.62
Col4a4Q9QZR9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a4Q9QZR9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a4Q9QZR9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col4a4Q9QZR9 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.92■□□□□ 0.62
Col4a4Q9QZR9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col4a4Q9QZR9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col4a4Q9QZR9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Col4a4Q9QZR9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a4Q9QZR9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a4Q9QZR9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a4Q9QZR9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a4Q9QZR9 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.91■□□□□ 0.62
Col4a4Q9QZR9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.91■□□□□ 0.62
Col4a4Q9QZR9 Gm18101-201ENSMUST00000215769 548 ntBASIC18.91■□□□□ 0.62
Col4a4Q9QZR9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a4Q9QZR9 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a4Q9QZR9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a4Q9QZR9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col4a4Q9QZR9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.9■□□□□ 0.62
Col4a4Q9QZR9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col4a4Q9QZR9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Col4a4Q9QZR9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Col4a4Q9QZR9 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Col4a4Q9QZR9 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.9■□□□□ 0.62
Col4a4Q9QZR9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col4a4Q9QZR9 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.9■□□□□ 0.62
Col4a4Q9QZR9 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col4a4Q9QZR9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Col4a4Q9QZR9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col4a4Q9QZR9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Col4a4Q9QZR9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col4a4Q9QZR9 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col4a4Q9QZR9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col4a4Q9QZR9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col4a4Q9QZR9 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col4a4Q9QZR9 Gm7461-201ENSMUST00000058918 827 ntBASIC18.89■□□□□ 0.61
Col4a4Q9QZR9 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col4a4Q9QZR9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.88■□□□□ 0.61
Col4a4Q9QZR9 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Col4a4Q9QZR9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a4Q9QZR9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a4Q9QZR9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.88■□□□□ 0.61
Col4a4Q9QZR9 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.88■□□□□ 0.61
Col4a4Q9QZR9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Col4a4Q9QZR9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a4Q9QZR9 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a4Q9QZR9 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Col4a4Q9QZR9 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a4Q9QZR9 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col4a4Q9QZR9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.88■□□□□ 0.61
Col4a4Q9QZR9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a4Q9QZR9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.87■□□□□ 0.61
Col4a4Q9QZR9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.87■□□□□ 0.61
Col4a4Q9QZR9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.87■□□□□ 0.61
Col4a4Q9QZR9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a4Q9QZR9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.87■□□□□ 0.61
Col4a4Q9QZR9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a4Q9QZR9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Col4a4Q9QZR9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a4Q9QZR9 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Col4a4Q9QZR9 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a4Q9QZR9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Col4a4Q9QZR9 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a4Q9QZR9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a4Q9QZR9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a4Q9QZR9 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a4Q9QZR9 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.86■□□□□ 0.61
Col4a4Q9QZR9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a4Q9QZR9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
Col4a4Q9QZR9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.85■□□□□ 0.61
Col4a4Q9QZR9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a4Q9QZR9 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a4Q9QZR9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a4Q9QZR9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Col4a4Q9QZR9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a4Q9QZR9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.85■□□□□ 0.61
Col4a4Q9QZR9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Col4a4Q9QZR9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a4Q9QZR9 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a4Q9QZR9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a4Q9QZR9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a4Q9QZR9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.84■□□□□ 0.61
Col4a4Q9QZR9 Mir6349-201ENSMUST00000184059 97 ntBASIC18.84■□□□□ 0.61
Col4a4Q9QZR9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms