Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC21.08■□□□□ 0.97
Nr2e3Q9QXZ7 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.08■□□□□ 0.97
Nr2e3Q9QXZ7 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.08■□□□□ 0.97
Nr2e3Q9QXZ7 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.96
Nr2e3Q9QXZ7 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nr2e3Q9QXZ7 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nr2e3Q9QXZ7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nr2e3Q9QXZ7 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Nr2e3Q9QXZ7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.07■□□□□ 0.96
Nr2e3Q9QXZ7 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nr2e3Q9QXZ7 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.07■□□□□ 0.96
Nr2e3Q9QXZ7 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nr2e3Q9QXZ7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nr2e3Q9QXZ7 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.07■□□□□ 0.96
Nr2e3Q9QXZ7 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nr2e3Q9QXZ7 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nr2e3Q9QXZ7 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nr2e3Q9QXZ7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nr2e3Q9QXZ7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nr2e3Q9QXZ7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nr2e3Q9QXZ7 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nr2e3Q9QXZ7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Nr2e3Q9QXZ7 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Nr2e3Q9QXZ7 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Nr2e3Q9QXZ7 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.06■□□□□ 0.96
Nr2e3Q9QXZ7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nr2e3Q9QXZ7 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nr2e3Q9QXZ7 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Nr2e3Q9QXZ7 Gm38342-201ENSMUST00000195710 2980 ntBASIC21.06■□□□□ 0.96
Nr2e3Q9QXZ7 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nr2e3Q9QXZ7 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nr2e3Q9QXZ7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nr2e3Q9QXZ7 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nr2e3Q9QXZ7 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nr2e3Q9QXZ7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nr2e3Q9QXZ7 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nr2e3Q9QXZ7 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.05■□□□□ 0.96
Nr2e3Q9QXZ7 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nr2e3Q9QXZ7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nr2e3Q9QXZ7 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nr2e3Q9QXZ7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nr2e3Q9QXZ7 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nr2e3Q9QXZ7 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nr2e3Q9QXZ7 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nr2e3Q9QXZ7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nr2e3Q9QXZ7 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nr2e3Q9QXZ7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nr2e3Q9QXZ7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nr2e3Q9QXZ7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nr2e3Q9QXZ7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Nr2e3Q9QXZ7 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nr2e3Q9QXZ7 Gm7290-201ENSMUST00000104990 617 ntBASIC21.04■□□□□ 0.96
Nr2e3Q9QXZ7 Gm12918-201ENSMUST00000120234 636 ntBASIC21.04■□□□□ 0.96
Nr2e3Q9QXZ7 Gm15710-201ENSMUST00000121821 636 ntBASIC21.04■□□□□ 0.96
Nr2e3Q9QXZ7 Gm5075-201ENSMUST00000196916 622 ntBASIC21.04■□□□□ 0.96
Nr2e3Q9QXZ7 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Nr2e3Q9QXZ7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.04■□□□□ 0.96
Nr2e3Q9QXZ7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.04■□□□□ 0.96
Nr2e3Q9QXZ7 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.04■□□□□ 0.96
Nr2e3Q9QXZ7 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Nr2e3Q9QXZ7 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nr2e3Q9QXZ7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nr2e3Q9QXZ7 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nr2e3Q9QXZ7 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nr2e3Q9QXZ7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nr2e3Q9QXZ7 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nr2e3Q9QXZ7 Gm13148-201ENSMUST00000118892 745 ntBASIC21.03■□□□□ 0.96
Nr2e3Q9QXZ7 Gm12933-201ENSMUST00000120203 872 ntBASIC21.03■□□□□ 0.96
Nr2e3Q9QXZ7 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Nr2e3Q9QXZ7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.03■□□□□ 0.96
Nr2e3Q9QXZ7 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nr2e3Q9QXZ7 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nr2e3Q9QXZ7 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Nr2e3Q9QXZ7 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.03■□□□□ 0.96
Nr2e3Q9QXZ7 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nr2e3Q9QXZ7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nr2e3Q9QXZ7 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Nr2e3Q9QXZ7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nr2e3Q9QXZ7 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Nr2e3Q9QXZ7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nr2e3Q9QXZ7 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nr2e3Q9QXZ7 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nr2e3Q9QXZ7 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.02■□□□□ 0.96
Nr2e3Q9QXZ7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.02■□□□□ 0.96
Nr2e3Q9QXZ7 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Nr2e3Q9QXZ7 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nr2e3Q9QXZ7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nr2e3Q9QXZ7 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nr2e3Q9QXZ7 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Nr2e3Q9QXZ7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Nr2e3Q9QXZ7 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.02■□□□□ 0.95
Nr2e3Q9QXZ7 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nr2e3Q9QXZ7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nr2e3Q9QXZ7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
Nr2e3Q9QXZ7 Mir5133-201ENSMUST00000174955 77 ntBASIC21.01■□□□□ 0.95
Nr2e3Q9QXZ7 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nr2e3Q9QXZ7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nr2e3Q9QXZ7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nr2e3Q9QXZ7 Gm8309-201ENSMUST00000206627 1448 ntBASIC21.01■□□□□ 0.95
Nr2e3Q9QXZ7 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms