Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sec61a2Q9JLR1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.71■□□□□ 0.27
Sec61a2Q9JLR1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sec61a2Q9JLR1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sec61a2Q9JLR1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sec61a2Q9JLR1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sec61a2Q9JLR1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sec61a2Q9JLR1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sec61a2Q9JLR1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sec61a2Q9JLR1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.71■□□□□ 0.27
Sec61a2Q9JLR1 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sec61a2Q9JLR1 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.71■□□□□ 0.26
Sec61a2Q9JLR1 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Sec61a2Q9JLR1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sec61a2Q9JLR1 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.7■□□□□ 0.26
Sec61a2Q9JLR1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.7■□□□□ 0.26
Sec61a2Q9JLR1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sec61a2Q9JLR1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sec61a2Q9JLR1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Sec61a2Q9JLR1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sec61a2Q9JLR1 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sec61a2Q9JLR1 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sec61a2Q9JLR1 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sec61a2Q9JLR1 Gm7860-201ENSMUST00000121190 879 ntBASIC16.7■□□□□ 0.26
Sec61a2Q9JLR1 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.7■□□□□ 0.26
Sec61a2Q9JLR1 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.7■□□□□ 0.26
Sec61a2Q9JLR1 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.7■□□□□ 0.26
Sec61a2Q9JLR1 Gm10493-201ENSMUST00000097270 612 ntBASIC16.7■□□□□ 0.26
Sec61a2Q9JLR1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.7■□□□□ 0.26
Sec61a2Q9JLR1 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sec61a2Q9JLR1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Sec61a2Q9JLR1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sec61a2Q9JLR1 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sec61a2Q9JLR1 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sec61a2Q9JLR1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sec61a2Q9JLR1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sec61a2Q9JLR1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sec61a2Q9JLR1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.69■□□□□ 0.26
Sec61a2Q9JLR1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sec61a2Q9JLR1 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.69■□□□□ 0.26
Sec61a2Q9JLR1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sec61a2Q9JLR1 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sec61a2Q9JLR1 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sec61a2Q9JLR1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sec61a2Q9JLR1 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sec61a2Q9JLR1 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sec61a2Q9JLR1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sec61a2Q9JLR1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sec61a2Q9JLR1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sec61a2Q9JLR1 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.69■□□□□ 0.26
Sec61a2Q9JLR1 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.69■□□□□ 0.26
Sec61a2Q9JLR1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sec61a2Q9JLR1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sec61a2Q9JLR1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sec61a2Q9JLR1 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sec61a2Q9JLR1 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sec61a2Q9JLR1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sec61a2Q9JLR1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Sec61a2Q9JLR1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sec61a2Q9JLR1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sec61a2Q9JLR1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.68■□□□□ 0.26
Sec61a2Q9JLR1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sec61a2Q9JLR1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sec61a2Q9JLR1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sec61a2Q9JLR1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sec61a2Q9JLR1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sec61a2Q9JLR1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Sec61a2Q9JLR1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sec61a2Q9JLR1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sec61a2Q9JLR1 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sec61a2Q9JLR1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sec61a2Q9JLR1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sec61a2Q9JLR1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sec61a2Q9JLR1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sec61a2Q9JLR1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sec61a2Q9JLR1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sec61a2Q9JLR1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.67■□□□□ 0.26
Sec61a2Q9JLR1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sec61a2Q9JLR1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sec61a2Q9JLR1 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.67■□□□□ 0.26
Sec61a2Q9JLR1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sec61a2Q9JLR1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sec61a2Q9JLR1 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sec61a2Q9JLR1 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sec61a2Q9JLR1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sec61a2Q9JLR1 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sec61a2Q9JLR1 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.66■□□□□ 0.26
Sec61a2Q9JLR1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.66■□□□□ 0.26
Sec61a2Q9JLR1 Gm26571-201ENSMUST00000181399 666 ntBASIC16.66■□□□□ 0.26
Sec61a2Q9JLR1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sec61a2Q9JLR1 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Sec61a2Q9JLR1 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sec61a2Q9JLR1 Gm9988-201ENSMUST00000069786 435 ntBASIC16.66■□□□□ 0.26
Sec61a2Q9JLR1 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sec61a2Q9JLR1 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Sec61a2Q9JLR1 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sec61a2Q9JLR1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Sec61a2Q9JLR1 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Sec61a2Q9JLR1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sec61a2Q9JLR1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms