Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Scn5aQ9JJV9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Scn5aQ9JJV9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn5aQ9JJV9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn5aQ9JJV9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn5aQ9JJV9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Scn5aQ9JJV9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Scn5aQ9JJV9 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.34■□□□□ 0.69
Scn5aQ9JJV9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn5aQ9JJV9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.34■□□□□ 0.69
Scn5aQ9JJV9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn5aQ9JJV9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn5aQ9JJV9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn5aQ9JJV9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Scn5aQ9JJV9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn5aQ9JJV9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Scn5aQ9JJV9 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn5aQ9JJV9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn5aQ9JJV9 Flg-201ENSMUST00000050758 1488 ntBASIC19.33■□□□□ 0.69
Scn5aQ9JJV9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scn5aQ9JJV9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Scn5aQ9JJV9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.33■□□□□ 0.68
Scn5aQ9JJV9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Scn5aQ9JJV9 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Scn5aQ9JJV9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Scn5aQ9JJV9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scn5aQ9JJV9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn5aQ9JJV9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.32■□□□□ 0.68
Scn5aQ9JJV9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.32■□□□□ 0.68
Scn5aQ9JJV9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Scn5aQ9JJV9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Scn5aQ9JJV9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn5aQ9JJV9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn5aQ9JJV9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scn5aQ9JJV9 Gm6433-201ENSMUST00000118634 875 ntBASIC19.32■□□□□ 0.68
Scn5aQ9JJV9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn5aQ9JJV9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn5aQ9JJV9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn5aQ9JJV9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.32■□□□□ 0.68
Scn5aQ9JJV9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Scn5aQ9JJV9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn5aQ9JJV9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Scn5aQ9JJV9 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.31■□□□□ 0.68
Scn5aQ9JJV9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Scn5aQ9JJV9 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.31■□□□□ 0.68
Scn5aQ9JJV9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn5aQ9JJV9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn5aQ9JJV9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn5aQ9JJV9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.31■□□□□ 0.68
Scn5aQ9JJV9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn5aQ9JJV9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn5aQ9JJV9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn5aQ9JJV9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Scn5aQ9JJV9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn5aQ9JJV9 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn5aQ9JJV9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn5aQ9JJV9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn5aQ9JJV9 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.3■□□□□ 0.68
Scn5aQ9JJV9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scn5aQ9JJV9 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn5aQ9JJV9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn5aQ9JJV9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn5aQ9JJV9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn5aQ9JJV9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Scn5aQ9JJV9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn5aQ9JJV9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Scn5aQ9JJV9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.29■□□□□ 0.68
Scn5aQ9JJV9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn5aQ9JJV9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn5aQ9JJV9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Scn5aQ9JJV9 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.29■□□□□ 0.68
Scn5aQ9JJV9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Scn5aQ9JJV9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Scn5aQ9JJV9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Scn5aQ9JJV9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Scn5aQ9JJV9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Scn5aQ9JJV9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Scn5aQ9JJV9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn5aQ9JJV9 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.29■□□□□ 0.68
Scn5aQ9JJV9 Gm10231-201ENSMUST00000181584 441 ntBASIC19.29■□□□□ 0.68
Scn5aQ9JJV9 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn5aQ9JJV9 Gm10175-202ENSMUST00000208752 441 ntBASIC19.29■□□□□ 0.68
Scn5aQ9JJV9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn5aQ9JJV9 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn5aQ9JJV9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn5aQ9JJV9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scn5aQ9JJV9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn5aQ9JJV9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Scn5aQ9JJV9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn5aQ9JJV9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn5aQ9JJV9 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Scn5aQ9JJV9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn5aQ9JJV9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scn5aQ9JJV9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Scn5aQ9JJV9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn5aQ9JJV9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.27■□□□□ 0.68
Scn5aQ9JJV9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Scn5aQ9JJV9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Scn5aQ9JJV9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.27■□□□□ 0.68
Scn5aQ9JJV9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms