Protein–RNA interactions for Protein: Q9JJ80

Rpf2, Ribosome production factor 2 homolog, mousemouse

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf2Q9JJ80 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rpf2Q9JJ80 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rpf2Q9JJ80 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.77■□□□□ 0.76
Rpf2Q9JJ80 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Rpf2Q9JJ80 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rpf2Q9JJ80 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rpf2Q9JJ80 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.75
Rpf2Q9JJ80 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rpf2Q9JJ80 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Rpf2Q9JJ80 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpf2Q9JJ80 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpf2Q9JJ80 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpf2Q9JJ80 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpf2Q9JJ80 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.76■□□□□ 0.75
Rpf2Q9JJ80 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rpf2Q9JJ80 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpf2Q9JJ80 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Rpf2Q9JJ80 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpf2Q9JJ80 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpf2Q9JJ80 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpf2Q9JJ80 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpf2Q9JJ80 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpf2Q9JJ80 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpf2Q9JJ80 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpf2Q9JJ80 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Rpf2Q9JJ80 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.75■□□□□ 0.75
Rpf2Q9JJ80 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Rpf2Q9JJ80 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpf2Q9JJ80 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Rpf2Q9JJ80 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Rpf2Q9JJ80 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpf2Q9JJ80 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.74■□□□□ 0.75
Rpf2Q9JJ80 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpf2Q9JJ80 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.74■□□□□ 0.75
Rpf2Q9JJ80 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpf2Q9JJ80 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Rpf2Q9JJ80 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
Rpf2Q9JJ80 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpf2Q9JJ80 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.74■□□□□ 0.75
Rpf2Q9JJ80 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.74■□□□□ 0.75
Rpf2Q9JJ80 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Rpf2Q9JJ80 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Rpf2Q9JJ80 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Rpf2Q9JJ80 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpf2Q9JJ80 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpf2Q9JJ80 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpf2Q9JJ80 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Rpf2Q9JJ80 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.73■□□□□ 0.75
Rpf2Q9JJ80 Mir7075-201ENSMUST00000184187 82 ntBASIC19.73■□□□□ 0.75
Rpf2Q9JJ80 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.73■□□□□ 0.75
Rpf2Q9JJ80 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.73■□□□□ 0.75
Rpf2Q9JJ80 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.73■□□□□ 0.75
Rpf2Q9JJ80 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rpf2Q9JJ80 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rpf2Q9JJ80 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Rpf2Q9JJ80 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rpf2Q9JJ80 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rpf2Q9JJ80 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.72■□□□□ 0.75
Rpf2Q9JJ80 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rpf2Q9JJ80 Gm43173-201ENSMUST00000202246 593 ntBASIC19.72■□□□□ 0.75
Rpf2Q9JJ80 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Rpf2Q9JJ80 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.72■□□□□ 0.75
Rpf2Q9JJ80 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rpf2Q9JJ80 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rpf2Q9JJ80 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpf2Q9JJ80 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.71■□□□□ 0.75
Rpf2Q9JJ80 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rpf2Q9JJ80 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rpf2Q9JJ80 Gm21956-201ENSMUST00000179946 522 ntBASIC19.71■□□□□ 0.75
Rpf2Q9JJ80 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.71■□□□□ 0.75
Rpf2Q9JJ80 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpf2Q9JJ80 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.71■□□□□ 0.75
Rpf2Q9JJ80 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpf2Q9JJ80 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpf2Q9JJ80 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpf2Q9JJ80 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpf2Q9JJ80 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Rpf2Q9JJ80 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpf2Q9JJ80 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpf2Q9JJ80 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpf2Q9JJ80 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpf2Q9JJ80 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rpf2Q9JJ80 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpf2Q9JJ80 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rpf2Q9JJ80 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpf2Q9JJ80 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpf2Q9JJ80 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Rpf2Q9JJ80 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Rpf2Q9JJ80 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rpf2Q9JJ80 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Rpf2Q9JJ80 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpf2Q9JJ80 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpf2Q9JJ80 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Rpf2Q9JJ80 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Rpf2Q9JJ80 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpf2Q9JJ80 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.69■□□□□ 0.74
Rpf2Q9JJ80 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpf2Q9JJ80 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Rpf2Q9JJ80 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
Rpf2Q9JJ80 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms