Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Copb1Q9JIF7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Copb1Q9JIF7 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Copb1Q9JIF7 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Copb1Q9JIF7 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Copb1Q9JIF7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Copb1Q9JIF7 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Copb1Q9JIF7 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Copb1Q9JIF7 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Copb1Q9JIF7 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Copb1Q9JIF7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Copb1Q9JIF7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Copb1Q9JIF7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Copb1Q9JIF7 Gm26833-201ENSMUST00000180899 440 ntBASIC20.36■□□□□ 0.85
Copb1Q9JIF7 Gm38205-201ENSMUST00000192243 258 ntBASIC20.36■□□□□ 0.85
Copb1Q9JIF7 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Copb1Q9JIF7 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Copb1Q9JIF7 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Copb1Q9JIF7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Copb1Q9JIF7 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Copb1Q9JIF7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Copb1Q9JIF7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.36■□□□□ 0.85
Copb1Q9JIF7 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Copb1Q9JIF7 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Copb1Q9JIF7 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Copb1Q9JIF7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Copb1Q9JIF7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Copb1Q9JIF7 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Copb1Q9JIF7 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.35■□□□□ 0.85
Copb1Q9JIF7 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.35■□□□□ 0.85
Copb1Q9JIF7 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Copb1Q9JIF7 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.35■□□□□ 0.85
Copb1Q9JIF7 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Copb1Q9JIF7 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.34■□□□□ 0.85
Copb1Q9JIF7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Copb1Q9JIF7 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.34■□□□□ 0.85
Copb1Q9JIF7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Copb1Q9JIF7 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Copb1Q9JIF7 Gm45417-201ENSMUST00000209533 758 ntBASIC20.34■□□□□ 0.85
Copb1Q9JIF7 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Copb1Q9JIF7 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Copb1Q9JIF7 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Copb1Q9JIF7 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Copb1Q9JIF7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Copb1Q9JIF7 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Copb1Q9JIF7 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Copb1Q9JIF7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Copb1Q9JIF7 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Copb1Q9JIF7 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Copb1Q9JIF7 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Copb1Q9JIF7 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.33■□□□□ 0.85
Copb1Q9JIF7 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Copb1Q9JIF7 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Copb1Q9JIF7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Copb1Q9JIF7 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Copb1Q9JIF7 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Copb1Q9JIF7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Copb1Q9JIF7 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.33■□□□□ 0.84
Copb1Q9JIF7 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Copb1Q9JIF7 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Copb1Q9JIF7 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Copb1Q9JIF7 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Copb1Q9JIF7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Copb1Q9JIF7 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Copb1Q9JIF7 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Copb1Q9JIF7 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Copb1Q9JIF7 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Copb1Q9JIF7 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.32■□□□□ 0.84
Copb1Q9JIF7 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Copb1Q9JIF7 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Copb1Q9JIF7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Copb1Q9JIF7 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Copb1Q9JIF7 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Copb1Q9JIF7 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Copb1Q9JIF7 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Copb1Q9JIF7 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.31■□□□□ 0.84
Copb1Q9JIF7 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.31■□□□□ 0.84
Copb1Q9JIF7 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Copb1Q9JIF7 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Copb1Q9JIF7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Copb1Q9JIF7 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Copb1Q9JIF7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Copb1Q9JIF7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Copb1Q9JIF7 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Copb1Q9JIF7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Copb1Q9JIF7 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Copb1Q9JIF7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Copb1Q9JIF7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.3■□□□□ 0.84
Copb1Q9JIF7 Gm43017-201ENSMUST00000198296 752 ntBASIC20.3■□□□□ 0.84
Copb1Q9JIF7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.3■□□□□ 0.84
Copb1Q9JIF7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Copb1Q9JIF7 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Copb1Q9JIF7 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.29■□□□□ 0.84
Copb1Q9JIF7 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.29■□□□□ 0.84
Copb1Q9JIF7 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Copb1Q9JIF7 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Copb1Q9JIF7 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Copb1Q9JIF7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.28■□□□□ 0.84
Copb1Q9JIF7 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Copb1Q9JIF7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms