Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.31■■□□□ 1
Col4a3bpQ9EQG9 Gm10849-201ENSMUST00000100397 618 ntBASIC21.31■■□□□ 1
Col4a3bpQ9EQG9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Col4a3bpQ9EQG9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.31■■□□□ 1
Col4a3bpQ9EQG9 Gm10033-202ENSMUST00000211874 928 ntBASIC21.31■■□□□ 1
Col4a3bpQ9EQG9 Gm18671-201ENSMUST00000214826 683 ntBASIC21.31■■□□□ 1
Col4a3bpQ9EQG9 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.31■■□□□ 1
Col4a3bpQ9EQG9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col4a3bpQ9EQG9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Col4a3bpQ9EQG9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC21.31■■□□□ 1
Col4a3bpQ9EQG9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col4a3bpQ9EQG9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Col4a3bpQ9EQG9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col4a3bpQ9EQG9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col4a3bpQ9EQG9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Col4a3bpQ9EQG9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Col4a3bpQ9EQG9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.3■■□□□ 1
Col4a3bpQ9EQG9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC21.3■■□□□ 1
Col4a3bpQ9EQG9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.3■■□□□ 1
Col4a3bpQ9EQG9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Col4a3bpQ9EQG9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.3■■□□□ 1
Col4a3bpQ9EQG9 Gm27032-201ENSMUST00000183124 1116 ntBASIC21.3■■□□□ 1
Col4a3bpQ9EQG9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.3■■□□□ 1
Col4a3bpQ9EQG9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.3■■□□□ 1
Col4a3bpQ9EQG9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Col4a3bpQ9EQG9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.3■■□□□ 1
Col4a3bpQ9EQG9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.3■■□□□ 1
Col4a3bpQ9EQG9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC21.3■■□□□ 1
Col4a3bpQ9EQG9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Col4a3bpQ9EQG9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Col4a3bpQ9EQG9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col4a3bpQ9EQG9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Col4a3bpQ9EQG9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Col4a3bpQ9EQG9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col4a3bpQ9EQG9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC21.29■■□□□ 1
Col4a3bpQ9EQG9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.29■■□□□ 1
Col4a3bpQ9EQG9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Col4a3bpQ9EQG9 Grk6-206ENSMUST00000224995 2971 ntBASIC21.29■■□□□ 1
Col4a3bpQ9EQG9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col4a3bpQ9EQG9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.29■■□□□ 1
Col4a3bpQ9EQG9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col4a3bpQ9EQG9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col4a3bpQ9EQG9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col4a3bpQ9EQG9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col4a3bpQ9EQG9 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Col4a3bpQ9EQG9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col4a3bpQ9EQG9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.28■■□□□ 1
Col4a3bpQ9EQG9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.28■■□□□ 1
Col4a3bpQ9EQG9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Col4a3bpQ9EQG9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.28■■□□□ 1
Col4a3bpQ9EQG9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.28■■□□□ 1
Col4a3bpQ9EQG9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col4a3bpQ9EQG9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col4a3bpQ9EQG9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.27■■□□□ 1
Col4a3bpQ9EQG9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Col4a3bpQ9EQG9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Col4a3bpQ9EQG9 Gm7291-201ENSMUST00000199147 382 ntBASIC21.27■■□□□ 1
Col4a3bpQ9EQG9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Col4a3bpQ9EQG9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
Col4a3bpQ9EQG9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.27■■□□□ 1
Col4a3bpQ9EQG9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Col4a3bpQ9EQG9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Col4a3bpQ9EQG9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Col4a3bpQ9EQG9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Col4a3bpQ9EQG9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.27■□□□□ 0.99
Col4a3bpQ9EQG9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Col4a3bpQ9EQG9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Col4a3bpQ9EQG9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Col4a3bpQ9EQG9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Col4a3bpQ9EQG9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Col4a3bpQ9EQG9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.26■□□□□ 0.99
Col4a3bpQ9EQG9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col4a3bpQ9EQG9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col4a3bpQ9EQG9 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.26■□□□□ 0.99
Col4a3bpQ9EQG9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Col4a3bpQ9EQG9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col4a3bpQ9EQG9 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC21.26■□□□□ 0.99
Col4a3bpQ9EQG9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col4a3bpQ9EQG9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Col4a3bpQ9EQG9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col4a3bpQ9EQG9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Col4a3bpQ9EQG9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col4a3bpQ9EQG9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col4a3bpQ9EQG9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col4a3bpQ9EQG9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Col4a3bpQ9EQG9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.25■□□□□ 0.99
Col4a3bpQ9EQG9 Gm27405-201ENSMUST00000184201 112 ntBASIC21.25■□□□□ 0.99
Col4a3bpQ9EQG9 Gm38205-201ENSMUST00000192243 258 ntBASIC21.25■□□□□ 0.99
Col4a3bpQ9EQG9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col4a3bpQ9EQG9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col4a3bpQ9EQG9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
Col4a3bpQ9EQG9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col4a3bpQ9EQG9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Col4a3bpQ9EQG9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col4a3bpQ9EQG9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.25■□□□□ 0.99
Col4a3bpQ9EQG9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col4a3bpQ9EQG9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col4a3bpQ9EQG9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col4a3bpQ9EQG9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Col4a3bpQ9EQG9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms