Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
Cpsf1Q9EPU4 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.74
Cpsf1Q9EPU4 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Cpsf1Q9EPU4 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC25.89■■□□□ 1.73
Cpsf1Q9EPU4 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Cpsf1Q9EPU4 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC25.88■■□□□ 1.73
Cpsf1Q9EPU4 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
Cpsf1Q9EPU4 Rncr4-201ENSMUST00000194541 2234 ntBASIC25.88■■□□□ 1.73
Cpsf1Q9EPU4 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Cpsf1Q9EPU4 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Cpsf1Q9EPU4 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Cpsf1Q9EPU4 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Cpsf1Q9EPU4 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
Cpsf1Q9EPU4 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC25.88■■□□□ 1.73
Cpsf1Q9EPU4 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
Cpsf1Q9EPU4 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
Cpsf1Q9EPU4 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Cpsf1Q9EPU4 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
Cpsf1Q9EPU4 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC25.87■■□□□ 1.73
Cpsf1Q9EPU4 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Cpsf1Q9EPU4 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Cpsf1Q9EPU4 Gm5643-201ENSMUST00000117081 966 ntBASIC25.87■■□□□ 1.73
Cpsf1Q9EPU4 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC25.87■■□□□ 1.73
Cpsf1Q9EPU4 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Cpsf1Q9EPU4 Gm45906-201ENSMUST00000208911 1430 ntBASIC25.87■■□□□ 1.73
Cpsf1Q9EPU4 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC25.87■■□□□ 1.73
Cpsf1Q9EPU4 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Cpsf1Q9EPU4 Gm21596-201ENSMUST00000178049 1316 ntBASIC25.86■■□□□ 1.73
Cpsf1Q9EPU4 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Cpsf1Q9EPU4 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Cpsf1Q9EPU4 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC25.86■■□□□ 1.73
Cpsf1Q9EPU4 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC25.86■■□□□ 1.73
Cpsf1Q9EPU4 Gm11249-201ENSMUST00000117071 859 ntBASIC25.86■■□□□ 1.73
Cpsf1Q9EPU4 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Cpsf1Q9EPU4 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
Cpsf1Q9EPU4 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Cpsf1Q9EPU4 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Cpsf1Q9EPU4 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Cpsf1Q9EPU4 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Cpsf1Q9EPU4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Cpsf1Q9EPU4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC25.85■■□□□ 1.73
Cpsf1Q9EPU4 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Cpsf1Q9EPU4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Cpsf1Q9EPU4 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
Cpsf1Q9EPU4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
Cpsf1Q9EPU4 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Cpsf1Q9EPU4 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Cpsf1Q9EPU4 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Cpsf1Q9EPU4 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Cpsf1Q9EPU4 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Cpsf1Q9EPU4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Cpsf1Q9EPU4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Cpsf1Q9EPU4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
Cpsf1Q9EPU4 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Cpsf1Q9EPU4 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Cpsf1Q9EPU4 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Cpsf1Q9EPU4 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC25.83■■□□□ 1.73
Cpsf1Q9EPU4 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC25.83■■□□□ 1.73
Cpsf1Q9EPU4 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Cpsf1Q9EPU4 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Cpsf1Q9EPU4 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Cpsf1Q9EPU4 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Cpsf1Q9EPU4 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC25.82■■□□□ 1.72
Cpsf1Q9EPU4 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Cpsf1Q9EPU4 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Cpsf1Q9EPU4 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Cpsf1Q9EPU4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Cpsf1Q9EPU4 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Cpsf1Q9EPU4 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Cpsf1Q9EPU4 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Cpsf1Q9EPU4 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC25.81■■□□□ 1.72
Cpsf1Q9EPU4 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Cpsf1Q9EPU4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
Cpsf1Q9EPU4 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
Cpsf1Q9EPU4 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC25.81■■□□□ 1.72
Cpsf1Q9EPU4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Cpsf1Q9EPU4 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC25.81■■□□□ 1.72
Cpsf1Q9EPU4 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Cpsf1Q9EPU4 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Cpsf1Q9EPU4 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
Cpsf1Q9EPU4 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC25.8■■□□□ 1.72
Cpsf1Q9EPU4 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Cpsf1Q9EPU4 Gm10812-201ENSMUST00000099864 546 ntBASIC25.8■■□□□ 1.72
Cpsf1Q9EPU4 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
Cpsf1Q9EPU4 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Cpsf1Q9EPU4 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Cpsf1Q9EPU4 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Cpsf1Q9EPU4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Cpsf1Q9EPU4 Gm13181-201ENSMUST00000120117 1069 ntBASIC25.8■■□□□ 1.72
Cpsf1Q9EPU4 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC25.8■■□□□ 1.72
Cpsf1Q9EPU4 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Cpsf1Q9EPU4 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Cpsf1Q9EPU4 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Cpsf1Q9EPU4 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Cpsf1Q9EPU4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
Cpsf1Q9EPU4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Cpsf1Q9EPU4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Cpsf1Q9EPU4 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC25.79■■□□□ 1.72
Cpsf1Q9EPU4 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Cpsf1Q9EPU4 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC25.78■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms