Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgn3Q9DCB1 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Hmgn3Q9DCB1 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgn3Q9DCB1 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.48■□□□□ 0.39
Hmgn3Q9DCB1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgn3Q9DCB1 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgn3Q9DCB1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgn3Q9DCB1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.47■□□□□ 0.39
Hmgn3Q9DCB1 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Hmgn3Q9DCB1 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgn3Q9DCB1 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.47■□□□□ 0.39
Hmgn3Q9DCB1 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgn3Q9DCB1 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgn3Q9DCB1 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgn3Q9DCB1 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgn3Q9DCB1 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgn3Q9DCB1 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgn3Q9DCB1 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgn3Q9DCB1 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.47■□□□□ 0.39
Hmgn3Q9DCB1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.47■□□□□ 0.39
Hmgn3Q9DCB1 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgn3Q9DCB1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgn3Q9DCB1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmgn3Q9DCB1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Hmgn3Q9DCB1 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmgn3Q9DCB1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmgn3Q9DCB1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmgn3Q9DCB1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
Hmgn3Q9DCB1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.46■□□□□ 0.39
Hmgn3Q9DCB1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Hmgn3Q9DCB1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Hmgn3Q9DCB1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Hmgn3Q9DCB1 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Hmgn3Q9DCB1 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgn3Q9DCB1 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgn3Q9DCB1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Hmgn3Q9DCB1 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgn3Q9DCB1 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgn3Q9DCB1 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgn3Q9DCB1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgn3Q9DCB1 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgn3Q9DCB1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgn3Q9DCB1 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgn3Q9DCB1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.45■□□□□ 0.38
Hmgn3Q9DCB1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.45■□□□□ 0.38
Hmgn3Q9DCB1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Hmgn3Q9DCB1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
Hmgn3Q9DCB1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgn3Q9DCB1 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgn3Q9DCB1 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgn3Q9DCB1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgn3Q9DCB1 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Hmgn3Q9DCB1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Hmgn3Q9DCB1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgn3Q9DCB1 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgn3Q9DCB1 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgn3Q9DCB1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgn3Q9DCB1 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgn3Q9DCB1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgn3Q9DCB1 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.44■□□□□ 0.38
Hmgn3Q9DCB1 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Hmgn3Q9DCB1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgn3Q9DCB1 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Hmgn3Q9DCB1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgn3Q9DCB1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgn3Q9DCB1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgn3Q9DCB1 Gm9870-201ENSMUST00000063874 645 ntBASIC17.44■□□□□ 0.38
Hmgn3Q9DCB1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgn3Q9DCB1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgn3Q9DCB1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Hmgn3Q9DCB1 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgn3Q9DCB1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgn3Q9DCB1 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgn3Q9DCB1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Hmgn3Q9DCB1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
Hmgn3Q9DCB1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmgn3Q9DCB1 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmgn3Q9DCB1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmgn3Q9DCB1 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmgn3Q9DCB1 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Hmgn3Q9DCB1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmgn3Q9DCB1 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.43■□□□□ 0.38
Hmgn3Q9DCB1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmgn3Q9DCB1 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Hmgn3Q9DCB1 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.43■□□□□ 0.38
Hmgn3Q9DCB1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.42■□□□□ 0.38
Hmgn3Q9DCB1 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn3Q9DCB1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn3Q9DCB1 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn3Q9DCB1 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn3Q9DCB1 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn3Q9DCB1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn3Q9DCB1 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn3Q9DCB1 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn3Q9DCB1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
Hmgn3Q9DCB1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn3Q9DCB1 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.42■□□□□ 0.38
Hmgn3Q9DCB1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.42■□□□□ 0.38
Hmgn3Q9DCB1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn3Q9DCB1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms