Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp2aQ9DB34 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp2aQ9DB34 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp2aQ9DB34 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Chmp2aQ9DB34 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp2aQ9DB34 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp2aQ9DB34 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp2aQ9DB34 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp2aQ9DB34 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp2aQ9DB34 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.38■□□□□ 0.69
Chmp2aQ9DB34 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp2aQ9DB34 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.38■□□□□ 0.69
Chmp2aQ9DB34 Gm37179-201ENSMUST00000194862 823 ntBASIC19.38■□□□□ 0.69
Chmp2aQ9DB34 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp2aQ9DB34 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.38■□□□□ 0.69
Chmp2aQ9DB34 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.38■□□□□ 0.69
Chmp2aQ9DB34 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp2aQ9DB34 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp2aQ9DB34 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp2aQ9DB34 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp2aQ9DB34 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp2aQ9DB34 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Chmp2aQ9DB34 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp2aQ9DB34 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp2aQ9DB34 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp2aQ9DB34 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp2aQ9DB34 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp2aQ9DB34 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp2aQ9DB34 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp2aQ9DB34 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp2aQ9DB34 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Chmp2aQ9DB34 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.37■□□□□ 0.69
Chmp2aQ9DB34 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp2aQ9DB34 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Chmp2aQ9DB34 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp2aQ9DB34 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp2aQ9DB34 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp2aQ9DB34 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp2aQ9DB34 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp2aQ9DB34 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp2aQ9DB34 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp2aQ9DB34 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp2aQ9DB34 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp2aQ9DB34 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Chmp2aQ9DB34 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp2aQ9DB34 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp2aQ9DB34 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp2aQ9DB34 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp2aQ9DB34 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp2aQ9DB34 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.36■□□□□ 0.69
Chmp2aQ9DB34 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp2aQ9DB34 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp2aQ9DB34 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.35■□□□□ 0.69
Chmp2aQ9DB34 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.35■□□□□ 0.69
Chmp2aQ9DB34 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp2aQ9DB34 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.35■□□□□ 0.69
Chmp2aQ9DB34 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp2aQ9DB34 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Chmp2aQ9DB34 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp2aQ9DB34 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp2aQ9DB34 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Chmp2aQ9DB34 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp2aQ9DB34 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp2aQ9DB34 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp2aQ9DB34 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Chmp2aQ9DB34 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Chmp2aQ9DB34 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp2aQ9DB34 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp2aQ9DB34 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Chmp2aQ9DB34 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Chmp2aQ9DB34 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp2aQ9DB34 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp2aQ9DB34 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.34■□□□□ 0.69
Chmp2aQ9DB34 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Chmp2aQ9DB34 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.34■□□□□ 0.69
Chmp2aQ9DB34 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.34■□□□□ 0.69
Chmp2aQ9DB34 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Chmp2aQ9DB34 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp2aQ9DB34 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp2aQ9DB34 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.34■□□□□ 0.69
Chmp2aQ9DB34 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.33■□□□□ 0.69
Chmp2aQ9DB34 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Chmp2aQ9DB34 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Chmp2aQ9DB34 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chmp2aQ9DB34 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.33■□□□□ 0.69
Chmp2aQ9DB34 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chmp2aQ9DB34 Golph3-205ENSMUST00000228671 2842 ntBASIC19.33■□□□□ 0.69
Chmp2aQ9DB34 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp2aQ9DB34 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.33■□□□□ 0.68
Chmp2aQ9DB34 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp2aQ9DB34 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp2aQ9DB34 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp2aQ9DB34 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp2aQ9DB34 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.32■□□□□ 0.68
Chmp2aQ9DB34 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp2aQ9DB34 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp2aQ9DB34 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.32■□□□□ 0.68
Chmp2aQ9DB34 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Chmp2aQ9DB34 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp2aQ9DB34 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms