Protein–RNA interactions for Protein: Q9D7U6

Cldn22, Claudin-22, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn22Q9D7U6 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.68■□□□□ 0.58
Cldn22Q9D7U6 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Cldn22Q9D7U6 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn22Q9D7U6 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn22Q9D7U6 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn22Q9D7U6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn22Q9D7U6 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Cldn22Q9D7U6 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn22Q9D7U6 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Cldn22Q9D7U6 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn22Q9D7U6 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn22Q9D7U6 Gm10602-201ENSMUST00000098239 609 ntBASIC18.67■□□□□ 0.58
Cldn22Q9D7U6 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn22Q9D7U6 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.67■□□□□ 0.58
Cldn22Q9D7U6 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Cldn22Q9D7U6 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn22Q9D7U6 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn22Q9D7U6 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn22Q9D7U6 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cldn22Q9D7U6 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.66■□□□□ 0.58
Cldn22Q9D7U6 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.66■□□□□ 0.58
Cldn22Q9D7U6 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.66■□□□□ 0.58
Cldn22Q9D7U6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn22Q9D7U6 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn22Q9D7U6 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.65■□□□□ 0.58
Cldn22Q9D7U6 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.65■□□□□ 0.58
Cldn22Q9D7U6 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.65■□□□□ 0.58
Cldn22Q9D7U6 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn22Q9D7U6 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn22Q9D7U6 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn22Q9D7U6 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.65■□□□□ 0.58
Cldn22Q9D7U6 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn22Q9D7U6 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn22Q9D7U6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn22Q9D7U6 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Cldn22Q9D7U6 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn22Q9D7U6 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn22Q9D7U6 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.65■□□□□ 0.58
Cldn22Q9D7U6 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.65■□□□□ 0.58
Cldn22Q9D7U6 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn22Q9D7U6 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn22Q9D7U6 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Cldn22Q9D7U6 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cldn22Q9D7U6 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cldn22Q9D7U6 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Cldn22Q9D7U6 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn22Q9D7U6 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn22Q9D7U6 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn22Q9D7U6 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn22Q9D7U6 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn22Q9D7U6 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Cldn22Q9D7U6 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Cldn22Q9D7U6 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn22Q9D7U6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn22Q9D7U6 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn22Q9D7U6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn22Q9D7U6 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn22Q9D7U6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn22Q9D7U6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Cldn22Q9D7U6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.63■□□□□ 0.57
Cldn22Q9D7U6 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.63■□□□□ 0.57
Cldn22Q9D7U6 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Cldn22Q9D7U6 Gm13146-201ENSMUST00000118508 780 ntBASIC18.63■□□□□ 0.57
Cldn22Q9D7U6 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.63■□□□□ 0.57
Cldn22Q9D7U6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.63■□□□□ 0.57
Cldn22Q9D7U6 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.63■□□□□ 0.57
Cldn22Q9D7U6 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Cldn22Q9D7U6 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn22Q9D7U6 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Cldn22Q9D7U6 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Cldn22Q9D7U6 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Cldn22Q9D7U6 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn22Q9D7U6 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
Cldn22Q9D7U6 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn22Q9D7U6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn22Q9D7U6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Cldn22Q9D7U6 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn22Q9D7U6 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn22Q9D7U6 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn22Q9D7U6 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.62■□□□□ 0.57
Cldn22Q9D7U6 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Cldn22Q9D7U6 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Cldn22Q9D7U6 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn22Q9D7U6 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn22Q9D7U6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn22Q9D7U6 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.62■□□□□ 0.57
Cldn22Q9D7U6 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.62■□□□□ 0.57
Cldn22Q9D7U6 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn22Q9D7U6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn22Q9D7U6 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn22Q9D7U6 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn22Q9D7U6 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn22Q9D7U6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn22Q9D7U6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cldn22Q9D7U6 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Cldn22Q9D7U6 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Cldn22Q9D7U6 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn22Q9D7U6 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn22Q9D7U6 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn22Q9D7U6 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms