Protein–RNA interactions for Protein: Q9D6I0

Rtl8c, Cxx1c protein, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl8cQ9D6I0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtl8cQ9D6I0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.65■□□□□ 0.26
Rtl8cQ9D6I0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rtl8cQ9D6I0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.65■□□□□ 0.26
Rtl8cQ9D6I0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtl8cQ9D6I0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Rtl8cQ9D6I0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtl8cQ9D6I0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtl8cQ9D6I0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rtl8cQ9D6I0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtl8cQ9D6I0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtl8cQ9D6I0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rtl8cQ9D6I0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtl8cQ9D6I0 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rtl8cQ9D6I0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rtl8cQ9D6I0 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.64■□□□□ 0.25
Rtl8cQ9D6I0 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rtl8cQ9D6I0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rtl8cQ9D6I0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
Rtl8cQ9D6I0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.64■□□□□ 0.25
Rtl8cQ9D6I0 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rtl8cQ9D6I0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Rtl8cQ9D6I0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rtl8cQ9D6I0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rtl8cQ9D6I0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rtl8cQ9D6I0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rtl8cQ9D6I0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rtl8cQ9D6I0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rtl8cQ9D6I0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.63■□□□□ 0.25
Rtl8cQ9D6I0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rtl8cQ9D6I0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rtl8cQ9D6I0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rtl8cQ9D6I0 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rtl8cQ9D6I0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rtl8cQ9D6I0 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rtl8cQ9D6I0 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.63■□□□□ 0.25
Rtl8cQ9D6I0 Gm13234-201ENSMUST00000120010 747 ntBASIC16.63■□□□□ 0.25
Rtl8cQ9D6I0 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.63■□□□□ 0.25
Rtl8cQ9D6I0 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rtl8cQ9D6I0 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rtl8cQ9D6I0 Gm10493-201ENSMUST00000097270 612 ntBASIC16.63■□□□□ 0.25
Rtl8cQ9D6I0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rtl8cQ9D6I0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rtl8cQ9D6I0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.63■□□□□ 0.25
Rtl8cQ9D6I0 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.63■□□□□ 0.25
Rtl8cQ9D6I0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rtl8cQ9D6I0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rtl8cQ9D6I0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.63■□□□□ 0.25
Rtl8cQ9D6I0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rtl8cQ9D6I0 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.62■□□□□ 0.25
Rtl8cQ9D6I0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Rtl8cQ9D6I0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtl8cQ9D6I0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rtl8cQ9D6I0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtl8cQ9D6I0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.62■□□□□ 0.25
Rtl8cQ9D6I0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rtl8cQ9D6I0 Gm42778-201ENSMUST00000199644 553 ntBASIC16.62■□□□□ 0.25
Rtl8cQ9D6I0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtl8cQ9D6I0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtl8cQ9D6I0 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.62■□□□□ 0.25
Rtl8cQ9D6I0 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.62■□□□□ 0.25
Rtl8cQ9D6I0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtl8cQ9D6I0 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtl8cQ9D6I0 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtl8cQ9D6I0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rtl8cQ9D6I0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtl8cQ9D6I0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtl8cQ9D6I0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.61■□□□□ 0.25
Rtl8cQ9D6I0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtl8cQ9D6I0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtl8cQ9D6I0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rtl8cQ9D6I0 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtl8cQ9D6I0 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rtl8cQ9D6I0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtl8cQ9D6I0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtl8cQ9D6I0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Rtl8cQ9D6I0 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtl8cQ9D6I0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Rtl8cQ9D6I0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtl8cQ9D6I0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rtl8cQ9D6I0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Rtl8cQ9D6I0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtl8cQ9D6I0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtl8cQ9D6I0 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtl8cQ9D6I0 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtl8cQ9D6I0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtl8cQ9D6I0 Gm13534-201ENSMUST00000121169 513 ntBASIC16.6■□□□□ 0.25
Rtl8cQ9D6I0 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Rtl8cQ9D6I0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtl8cQ9D6I0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtl8cQ9D6I0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Rtl8cQ9D6I0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtl8cQ9D6I0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtl8cQ9D6I0 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.6■□□□□ 0.25
Rtl8cQ9D6I0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rtl8cQ9D6I0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtl8cQ9D6I0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtl8cQ9D6I0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Rtl8cQ9D6I0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtl8cQ9D6I0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms