Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cfap53Q9D439 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cfap53Q9D439 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cfap53Q9D439 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cfap53Q9D439 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cfap53Q9D439 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Cfap53Q9D439 Gm13146-201ENSMUST00000118508 780 ntBASIC20.38■□□□□ 0.85
Cfap53Q9D439 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.38■□□□□ 0.85
Cfap53Q9D439 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
Cfap53Q9D439 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cfap53Q9D439 Gm5874-201ENSMUST00000096101 508 ntBASIC20.38■□□□□ 0.85
Cfap53Q9D439 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cfap53Q9D439 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cfap53Q9D439 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cfap53Q9D439 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cfap53Q9D439 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cfap53Q9D439 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cfap53Q9D439 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cfap53Q9D439 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cfap53Q9D439 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.37■□□□□ 0.85
Cfap53Q9D439 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.37■□□□□ 0.85
Cfap53Q9D439 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cfap53Q9D439 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cfap53Q9D439 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cfap53Q9D439 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.37■□□□□ 0.85
Cfap53Q9D439 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cfap53Q9D439 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.37■□□□□ 0.85
Cfap53Q9D439 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cfap53Q9D439 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cfap53Q9D439 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Cfap53Q9D439 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cfap53Q9D439 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cfap53Q9D439 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cfap53Q9D439 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cfap53Q9D439 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cfap53Q9D439 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.36■□□□□ 0.85
Cfap53Q9D439 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cfap53Q9D439 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cfap53Q9D439 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
Cfap53Q9D439 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cfap53Q9D439 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cfap53Q9D439 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cfap53Q9D439 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cfap53Q9D439 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cfap53Q9D439 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Cfap53Q9D439 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Cfap53Q9D439 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cfap53Q9D439 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cfap53Q9D439 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cfap53Q9D439 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cfap53Q9D439 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Cfap53Q9D439 Golph3-205ENSMUST00000228671 2842 ntBASIC20.35■□□□□ 0.85
Cfap53Q9D439 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cfap53Q9D439 Gm18671-201ENSMUST00000214826 683 ntBASIC20.35■□□□□ 0.85
Cfap53Q9D439 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cfap53Q9D439 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cfap53Q9D439 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.35■□□□□ 0.85
Cfap53Q9D439 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Cfap53Q9D439 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.35■□□□□ 0.85
Cfap53Q9D439 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cfap53Q9D439 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Cfap53Q9D439 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Cfap53Q9D439 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cfap53Q9D439 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cfap53Q9D439 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
Cfap53Q9D439 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cfap53Q9D439 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Cfap53Q9D439 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Cfap53Q9D439 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cfap53Q9D439 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cfap53Q9D439 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cfap53Q9D439 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cfap53Q9D439 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.34■□□□□ 0.85
Cfap53Q9D439 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cfap53Q9D439 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cfap53Q9D439 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cfap53Q9D439 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cfap53Q9D439 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cfap53Q9D439 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cfap53Q9D439 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cfap53Q9D439 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.33■□□□□ 0.85
Cfap53Q9D439 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.33■□□□□ 0.85
Cfap53Q9D439 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.33■□□□□ 0.84
Cfap53Q9D439 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cfap53Q9D439 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Cfap53Q9D439 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
Cfap53Q9D439 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cfap53Q9D439 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cfap53Q9D439 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cfap53Q9D439 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cfap53Q9D439 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cfap53Q9D439 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.32■□□□□ 0.84
Cfap53Q9D439 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cfap53Q9D439 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cfap53Q9D439 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cfap53Q9D439 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cfap53Q9D439 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Cfap53Q9D439 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cfap53Q9D439 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Cfap53Q9D439 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms