Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Gm34391-201ENSMUST00000203706 907 ntBASIC20.09■□□□□ 0.81
Lysmd1Q9D0E3 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lysmd1Q9D0E3 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lysmd1Q9D0E3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lysmd1Q9D0E3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lysmd1Q9D0E3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lysmd1Q9D0E3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lysmd1Q9D0E3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lysmd1Q9D0E3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lysmd1Q9D0E3 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Lysmd1Q9D0E3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Lysmd1Q9D0E3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lysmd1Q9D0E3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lysmd1Q9D0E3 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lysmd1Q9D0E3 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC20.08■□□□□ 0.81
Lysmd1Q9D0E3 Gm12085-201ENSMUST00000119263 940 ntBASIC20.08■□□□□ 0.81
Lysmd1Q9D0E3 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC20.08■□□□□ 0.81
Lysmd1Q9D0E3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Lysmd1Q9D0E3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Lysmd1Q9D0E3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lysmd1Q9D0E3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lysmd1Q9D0E3 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Lysmd1Q9D0E3 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Lysmd1Q9D0E3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Lysmd1Q9D0E3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lysmd1Q9D0E3 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
Lysmd1Q9D0E3 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lysmd1Q9D0E3 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.07■□□□□ 0.8
Lysmd1Q9D0E3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lysmd1Q9D0E3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lysmd1Q9D0E3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Lysmd1Q9D0E3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Lysmd1Q9D0E3 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.06■□□□□ 0.8
Lysmd1Q9D0E3 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lysmd1Q9D0E3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC20.06■□□□□ 0.8
Lysmd1Q9D0E3 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Lysmd1Q9D0E3 Gm18206-201ENSMUST00000207027 926 ntBASIC20.06■□□□□ 0.8
Lysmd1Q9D0E3 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lysmd1Q9D0E3 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Lysmd1Q9D0E3 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lysmd1Q9D0E3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lysmd1Q9D0E3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lysmd1Q9D0E3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lysmd1Q9D0E3 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lysmd1Q9D0E3 Gm13884-201ENSMUST00000118103 829 ntBASIC20.05■□□□□ 0.8
Lysmd1Q9D0E3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Lysmd1Q9D0E3 Gm18733-201ENSMUST00000173950 856 ntBASIC20.05■□□□□ 0.8
Lysmd1Q9D0E3 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Lysmd1Q9D0E3 Gm27357-201ENSMUST00000183754 135 ntBASIC20.05■□□□□ 0.8
Lysmd1Q9D0E3 Mir8098-201ENSMUST00000184011 137 ntBASIC20.05■□□□□ 0.8
Lysmd1Q9D0E3 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Lysmd1Q9D0E3 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.05■□□□□ 0.8
Lysmd1Q9D0E3 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.05■□□□□ 0.8
Lysmd1Q9D0E3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lysmd1Q9D0E3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.04■□□□□ 0.8
Lysmd1Q9D0E3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lysmd1Q9D0E3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.04■□□□□ 0.8
Lysmd1Q9D0E3 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Lysmd1Q9D0E3 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Lysmd1Q9D0E3 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.04■□□□□ 0.8
Lysmd1Q9D0E3 Gm21559-201ENSMUST00000220638 855 ntBASIC20.04■□□□□ 0.8
Lysmd1Q9D0E3 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
Lysmd1Q9D0E3 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Lysmd1Q9D0E3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lysmd1Q9D0E3 Gm8587-201ENSMUST00000076538 843 ntBASIC20.04■□□□□ 0.8
Lysmd1Q9D0E3 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lysmd1Q9D0E3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Lysmd1Q9D0E3 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lysmd1Q9D0E3 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Lysmd1Q9D0E3 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lysmd1Q9D0E3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.03■□□□□ 0.8
Lysmd1Q9D0E3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lysmd1Q9D0E3 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC20.03■□□□□ 0.8
Lysmd1Q9D0E3 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Lysmd1Q9D0E3 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC20.03■□□□□ 0.8
Lysmd1Q9D0E3 Otx2os1-206ENSMUST00000228153 787 ntBASIC20.03■□□□□ 0.8
Lysmd1Q9D0E3 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lysmd1Q9D0E3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Lysmd1Q9D0E3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Lysmd1Q9D0E3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lysmd1Q9D0E3 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lysmd1Q9D0E3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Lysmd1Q9D0E3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lysmd1Q9D0E3 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Lysmd1Q9D0E3 Gm27389-201ENSMUST00000183622 195 ntBASIC20.02■□□□□ 0.8
Lysmd1Q9D0E3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.02■□□□□ 0.8
Lysmd1Q9D0E3 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Lysmd1Q9D0E3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.02■□□□□ 0.8
Lysmd1Q9D0E3 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lysmd1Q9D0E3 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lysmd1Q9D0E3 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Lysmd1Q9D0E3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Lysmd1Q9D0E3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Lysmd1Q9D0E3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Lysmd1Q9D0E3 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Lysmd1Q9D0E3 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Lysmd1Q9D0E3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lysmd1Q9D0E3 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Lysmd1Q9D0E3 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Lysmd1Q9D0E3 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms