Protein–RNA interactions for Protein: Q9D071

Mms19, MMS19 nucleotide excision repair protein homolog, mousemouse

Predictions only

Length 1,031 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mms19Q9D071 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.85■□□□□ 0.77
Mms19Q9D071 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mms19Q9D071 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.85■□□□□ 0.77
Mms19Q9D071 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Mms19Q9D071 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mms19Q9D071 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Mms19Q9D071 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Mms19Q9D071 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Mms19Q9D071 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mms19Q9D071 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mms19Q9D071 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mms19Q9D071 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mms19Q9D071 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mms19Q9D071 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mms19Q9D071 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mms19Q9D071 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mms19Q9D071 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Mms19Q9D071 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.84■□□□□ 0.77
Mms19Q9D071 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mms19Q9D071 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
Mms19Q9D071 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mms19Q9D071 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mms19Q9D071 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Mms19Q9D071 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mms19Q9D071 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mms19Q9D071 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.83■□□□□ 0.77
Mms19Q9D071 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mms19Q9D071 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mms19Q9D071 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Mms19Q9D071 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Mms19Q9D071 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Mms19Q9D071 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Mms19Q9D071 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Mms19Q9D071 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Mms19Q9D071 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Mms19Q9D071 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Mms19Q9D071 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Mms19Q9D071 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mms19Q9D071 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.82■□□□□ 0.76
Mms19Q9D071 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mms19Q9D071 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Mms19Q9D071 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Mms19Q9D071 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mms19Q9D071 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Mms19Q9D071 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mms19Q9D071 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Mms19Q9D071 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mms19Q9D071 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mms19Q9D071 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mms19Q9D071 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mms19Q9D071 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.81■□□□□ 0.76
Mms19Q9D071 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mms19Q9D071 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mms19Q9D071 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mms19Q9D071 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Mms19Q9D071 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.81■□□□□ 0.76
Mms19Q9D071 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mms19Q9D071 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Mms19Q9D071 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Mms19Q9D071 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mms19Q9D071 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mms19Q9D071 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mms19Q9D071 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.81■□□□□ 0.76
Mms19Q9D071 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mms19Q9D071 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mms19Q9D071 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mms19Q9D071 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mms19Q9D071 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mms19Q9D071 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mms19Q9D071 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Mms19Q9D071 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mms19Q9D071 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Mms19Q9D071 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mms19Q9D071 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mms19Q9D071 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mms19Q9D071 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Mms19Q9D071 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Mms19Q9D071 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mms19Q9D071 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mms19Q9D071 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Mms19Q9D071 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Mms19Q9D071 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.79■□□□□ 0.76
Mms19Q9D071 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mms19Q9D071 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mms19Q9D071 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
Mms19Q9D071 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mms19Q9D071 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Mms19Q9D071 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mms19Q9D071 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mms19Q9D071 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mms19Q9D071 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mms19Q9D071 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mms19Q9D071 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Mms19Q9D071 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mms19Q9D071 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Mms19Q9D071 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mms19Q9D071 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mms19Q9D071 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
Mms19Q9D071 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mms19Q9D071 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms