Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smc3Q9CW03 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smc3Q9CW03 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smc3Q9CW03 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smc3Q9CW03 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smc3Q9CW03 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Smc3Q9CW03 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Smc3Q9CW03 Gm26833-201ENSMUST00000180899 440 ntBASIC21.85■■□□□ 1.09
Smc3Q9CW03 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smc3Q9CW03 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smc3Q9CW03 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smc3Q9CW03 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smc3Q9CW03 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.85■■□□□ 1.09
Smc3Q9CW03 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smc3Q9CW03 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smc3Q9CW03 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smc3Q9CW03 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Smc3Q9CW03 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smc3Q9CW03 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smc3Q9CW03 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smc3Q9CW03 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smc3Q9CW03 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smc3Q9CW03 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Smc3Q9CW03 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Smc3Q9CW03 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smc3Q9CW03 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
Smc3Q9CW03 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smc3Q9CW03 Gm45417-201ENSMUST00000209533 758 ntBASIC21.84■■□□□ 1.09
Smc3Q9CW03 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smc3Q9CW03 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smc3Q9CW03 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smc3Q9CW03 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smc3Q9CW03 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Smc3Q9CW03 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.09
Smc3Q9CW03 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smc3Q9CW03 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smc3Q9CW03 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smc3Q9CW03 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smc3Q9CW03 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smc3Q9CW03 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smc3Q9CW03 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Smc3Q9CW03 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Smc3Q9CW03 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smc3Q9CW03 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Smc3Q9CW03 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Smc3Q9CW03 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.82■■□□□ 1.08
Smc3Q9CW03 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Smc3Q9CW03 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC21.82■■□□□ 1.08
Smc3Q9CW03 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Smc3Q9CW03 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.82■■□□□ 1.08
Smc3Q9CW03 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smc3Q9CW03 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smc3Q9CW03 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smc3Q9CW03 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smc3Q9CW03 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smc3Q9CW03 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smc3Q9CW03 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smc3Q9CW03 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Smc3Q9CW03 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smc3Q9CW03 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Smc3Q9CW03 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smc3Q9CW03 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Smc3Q9CW03 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Smc3Q9CW03 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smc3Q9CW03 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC21.81■■□□□ 1.08
Smc3Q9CW03 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smc3Q9CW03 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smc3Q9CW03 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC21.81■■□□□ 1.08
Smc3Q9CW03 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Smc3Q9CW03 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Smc3Q9CW03 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smc3Q9CW03 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.8■■□□□ 1.08
Smc3Q9CW03 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Smc3Q9CW03 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc3Q9CW03 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc3Q9CW03 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Smc3Q9CW03 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc3Q9CW03 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC21.8■■□□□ 1.08
Smc3Q9CW03 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Smc3Q9CW03 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Smc3Q9CW03 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Smc3Q9CW03 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Smc3Q9CW03 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.8■■□□□ 1.08
Smc3Q9CW03 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.8■■□□□ 1.08
Smc3Q9CW03 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc3Q9CW03 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc3Q9CW03 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc3Q9CW03 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc3Q9CW03 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc3Q9CW03 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc3Q9CW03 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smc3Q9CW03 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smc3Q9CW03 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC21.79■■□□□ 1.08
Smc3Q9CW03 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smc3Q9CW03 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smc3Q9CW03 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Smc3Q9CW03 Gm27032-201ENSMUST00000183124 1116 ntBASIC21.79■■□□□ 1.08
Smc3Q9CW03 Gm43017-201ENSMUST00000198296 752 ntBASIC21.79■■□□□ 1.08
Smc3Q9CW03 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.79■■□□□ 1.08
Smc3Q9CW03 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms