Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cldnd1Q9CQX5 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cldnd1Q9CQX5 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldnd1Q9CQX5 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cldnd1Q9CQX5 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.13■□□□□ 0.65
Cldnd1Q9CQX5 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldnd1Q9CQX5 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Cldnd1Q9CQX5 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldnd1Q9CQX5 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cldnd1Q9CQX5 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.13■□□□□ 0.65
Cldnd1Q9CQX5 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Cldnd1Q9CQX5 Gm7889-201ENSMUST00000185591 958 ntBASIC19.13■□□□□ 0.65
Cldnd1Q9CQX5 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.13■□□□□ 0.65
Cldnd1Q9CQX5 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cldnd1Q9CQX5 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldnd1Q9CQX5 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Cldnd1Q9CQX5 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Cldnd1Q9CQX5 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cldnd1Q9CQX5 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldnd1Q9CQX5 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldnd1Q9CQX5 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldnd1Q9CQX5 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldnd1Q9CQX5 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldnd1Q9CQX5 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Cldnd1Q9CQX5 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cldnd1Q9CQX5 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cldnd1Q9CQX5 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cldnd1Q9CQX5 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Cldnd1Q9CQX5 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cldnd1Q9CQX5 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cldnd1Q9CQX5 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cldnd1Q9CQX5 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.12■□□□□ 0.65
Cldnd1Q9CQX5 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cldnd1Q9CQX5 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Cldnd1Q9CQX5 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cldnd1Q9CQX5 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cldnd1Q9CQX5 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldnd1Q9CQX5 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldnd1Q9CQX5 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cldnd1Q9CQX5 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
Cldnd1Q9CQX5 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Cldnd1Q9CQX5 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.11■□□□□ 0.65
Cldnd1Q9CQX5 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Cldnd1Q9CQX5 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.11■□□□□ 0.65
Cldnd1Q9CQX5 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cldnd1Q9CQX5 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldnd1Q9CQX5 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cldnd1Q9CQX5 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldnd1Q9CQX5 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldnd1Q9CQX5 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldnd1Q9CQX5 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Cldnd1Q9CQX5 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldnd1Q9CQX5 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldnd1Q9CQX5 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldnd1Q9CQX5 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Cldnd1Q9CQX5 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Cldnd1Q9CQX5 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cldnd1Q9CQX5 Gm10138-203ENSMUST00000206952 366 ntBASIC19.1■□□□□ 0.65
Cldnd1Q9CQX5 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldnd1Q9CQX5 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldnd1Q9CQX5 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Cldnd1Q9CQX5 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldnd1Q9CQX5 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.09■□□□□ 0.65
Cldnd1Q9CQX5 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Cldnd1Q9CQX5 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Cldnd1Q9CQX5 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cldnd1Q9CQX5 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldnd1Q9CQX5 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cldnd1Q9CQX5 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cldnd1Q9CQX5 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldnd1Q9CQX5 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.09■□□□□ 0.65
Cldnd1Q9CQX5 Gm42545-201ENSMUST00000202755 922 ntBASIC19.09■□□□□ 0.65
Cldnd1Q9CQX5 Gm18025-201ENSMUST00000221733 862 ntBASIC19.09■□□□□ 0.65
Cldnd1Q9CQX5 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Cldnd1Q9CQX5 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Cldnd1Q9CQX5 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldnd1Q9CQX5 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Cldnd1Q9CQX5 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cldnd1Q9CQX5 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.08■□□□□ 0.65
Cldnd1Q9CQX5 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cldnd1Q9CQX5 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Cldnd1Q9CQX5 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.08■□□□□ 0.65
Cldnd1Q9CQX5 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Cldnd1Q9CQX5 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cldnd1Q9CQX5 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cldnd1Q9CQX5 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cldnd1Q9CQX5 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cldnd1Q9CQX5 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Cldnd1Q9CQX5 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cldnd1Q9CQX5 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.08■□□□□ 0.64
Cldnd1Q9CQX5 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Cldnd1Q9CQX5 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
Cldnd1Q9CQX5 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.08■□□□□ 0.64
Cldnd1Q9CQX5 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.08■□□□□ 0.64
Cldnd1Q9CQX5 Zfp783-201ENSMUST00000095946 670 ntBASIC19.08■□□□□ 0.64
Cldnd1Q9CQX5 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cldnd1Q9CQX5 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Cldnd1Q9CQX5 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cldnd1Q9CQX5 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cldnd1Q9CQX5 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms