Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61bQ9CQS8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61bQ9CQS8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61bQ9CQS8 Gm44711-201ENSMUST00000205414 1264 ntBASIC9.98□□□□□ -0.81
Sec61bQ9CQS8 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61bQ9CQS8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61bQ9CQS8 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61bQ9CQS8 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61bQ9CQS8 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61bQ9CQS8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Sec61bQ9CQS8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61bQ9CQS8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC9.98□□□□□ -0.81
Sec61bQ9CQS8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61bQ9CQS8 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61bQ9CQS8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61bQ9CQS8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61bQ9CQS8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61bQ9CQS8 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61bQ9CQS8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61bQ9CQS8 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61bQ9CQS8 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61bQ9CQS8 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61bQ9CQS8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC9.97□□□□□ -0.81
Sec61bQ9CQS8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC9.97□□□□□ -0.81
Sec61bQ9CQS8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC9.97□□□□□ -0.81
Sec61bQ9CQS8 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Sec61bQ9CQS8 AC160393.1-201ENSMUST00000218378 1279 ntBASIC9.97□□□□□ -0.81
Sec61bQ9CQS8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC9.97□□□□□ -0.81
Sec61bQ9CQS8 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Sec61bQ9CQS8 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Sec61bQ9CQS8 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Sec61bQ9CQS8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
Sec61bQ9CQS8 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61bQ9CQS8 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61bQ9CQS8 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Sec61bQ9CQS8 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Sec61bQ9CQS8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61bQ9CQS8 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sec61bQ9CQS8 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Sec61bQ9CQS8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sec61bQ9CQS8 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sec61bQ9CQS8 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sec61bQ9CQS8 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Sec61bQ9CQS8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sec61bQ9CQS8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sec61bQ9CQS8 Gm12896-201ENSMUST00000118430 226 ntBASIC9.96□□□□□ -0.82
Sec61bQ9CQS8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC9.96□□□□□ -0.82
Sec61bQ9CQS8 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Sec61bQ9CQS8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC9.96□□□□□ -0.82
Sec61bQ9CQS8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC9.96□□□□□ -0.82
Sec61bQ9CQS8 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sec61bQ9CQS8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sec61bQ9CQS8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sec61bQ9CQS8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sec61bQ9CQS8 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sec61bQ9CQS8 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Sec61bQ9CQS8 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sec61bQ9CQS8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Sec61bQ9CQS8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sec61bQ9CQS8 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Sec61bQ9CQS8 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sec61bQ9CQS8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Sec61bQ9CQS8 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Sec61bQ9CQS8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sec61bQ9CQS8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sec61bQ9CQS8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61bQ9CQS8 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61bQ9CQS8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61bQ9CQS8 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61bQ9CQS8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61bQ9CQS8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61bQ9CQS8 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC9.95□□□□□ -0.82
Sec61bQ9CQS8 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61bQ9CQS8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC9.95□□□□□ -0.82
Sec61bQ9CQS8 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC9.95□□□□□ -0.82
Sec61bQ9CQS8 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61bQ9CQS8 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61bQ9CQS8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC9.95□□□□□ -0.82
Sec61bQ9CQS8 Gm18666-201ENSMUST00000190039 958 ntBASIC9.95□□□□□ -0.82
Sec61bQ9CQS8 Arhgef33-211ENSMUST00000225658 473 ntBASIC9.95□□□□□ -0.82
Sec61bQ9CQS8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61bQ9CQS8 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61bQ9CQS8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC9.95□□□□□ -0.82
Sec61bQ9CQS8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Sec61bQ9CQS8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61bQ9CQS8 Gm13042-201ENSMUST00000119244 1955 ntBASIC9.95□□□□□ -0.82
Sec61bQ9CQS8 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Sec61bQ9CQS8 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61bQ9CQS8 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61bQ9CQS8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61bQ9CQS8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61bQ9CQS8 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC9.95□□□□□ -0.82
Sec61bQ9CQS8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61bQ9CQS8 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61bQ9CQS8 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61bQ9CQS8 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61bQ9CQS8 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61bQ9CQS8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61bQ9CQS8 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61bQ9CQS8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms