Protein–RNA interactions for Protein: Q9CPN9

2210010C04Rik, RIKEN cDNA 2210010C04 gene, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
2210010C04RikQ9CPN9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
2210010C04RikQ9CPN9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
2210010C04RikQ9CPN9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
2210010C04RikQ9CPN9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.1■□□□□ 0.17
2210010C04RikQ9CPN9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
2210010C04RikQ9CPN9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
2210010C04RikQ9CPN9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
2210010C04RikQ9CPN9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
2210010C04RikQ9CPN9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
2210010C04RikQ9CPN9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
2210010C04RikQ9CPN9 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.1■□□□□ 0.17
2210010C04RikQ9CPN9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
2210010C04RikQ9CPN9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
2210010C04RikQ9CPN9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
2210010C04RikQ9CPN9 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
2210010C04RikQ9CPN9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
2210010C04RikQ9CPN9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
2210010C04RikQ9CPN9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
2210010C04RikQ9CPN9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
2210010C04RikQ9CPN9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
2210010C04RikQ9CPN9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
2210010C04RikQ9CPN9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
2210010C04RikQ9CPN9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
2210010C04RikQ9CPN9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
2210010C04RikQ9CPN9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
2210010C04RikQ9CPN9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
2210010C04RikQ9CPN9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
2210010C04RikQ9CPN9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
2210010C04RikQ9CPN9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
2210010C04RikQ9CPN9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
2210010C04RikQ9CPN9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
2210010C04RikQ9CPN9 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
2210010C04RikQ9CPN9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
2210010C04RikQ9CPN9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
2210010C04RikQ9CPN9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
2210010C04RikQ9CPN9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
2210010C04RikQ9CPN9 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
2210010C04RikQ9CPN9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.08■□□□□ 0.16
2210010C04RikQ9CPN9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
2210010C04RikQ9CPN9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
2210010C04RikQ9CPN9 Gm8493-201ENSMUST00000196881 489 ntBASIC16.08■□□□□ 0.16
2210010C04RikQ9CPN9 Gm43173-201ENSMUST00000202246 593 ntBASIC16.08■□□□□ 0.16
2210010C04RikQ9CPN9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.08■□□□□ 0.16
2210010C04RikQ9CPN9 Gm6139-201ENSMUST00000079261 882 ntBASIC16.08■□□□□ 0.16
2210010C04RikQ9CPN9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
2210010C04RikQ9CPN9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
2210010C04RikQ9CPN9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
2210010C04RikQ9CPN9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
2210010C04RikQ9CPN9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
2210010C04RikQ9CPN9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
2210010C04RikQ9CPN9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
2210010C04RikQ9CPN9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.07■□□□□ 0.16
2210010C04RikQ9CPN9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.07■□□□□ 0.16
2210010C04RikQ9CPN9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.07■□□□□ 0.16
2210010C04RikQ9CPN9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.07■□□□□ 0.16
2210010C04RikQ9CPN9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
2210010C04RikQ9CPN9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
2210010C04RikQ9CPN9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
2210010C04RikQ9CPN9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
2210010C04RikQ9CPN9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
2210010C04RikQ9CPN9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
2210010C04RikQ9CPN9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
2210010C04RikQ9CPN9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
2210010C04RikQ9CPN9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
2210010C04RikQ9CPN9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.07■□□□□ 0.16
2210010C04RikQ9CPN9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.07■□□□□ 0.16
2210010C04RikQ9CPN9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
2210010C04RikQ9CPN9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
2210010C04RikQ9CPN9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
2210010C04RikQ9CPN9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
2210010C04RikQ9CPN9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
2210010C04RikQ9CPN9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.06■□□□□ 0.16
2210010C04RikQ9CPN9 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.06■□□□□ 0.16
2210010C04RikQ9CPN9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
2210010C04RikQ9CPN9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
2210010C04RikQ9CPN9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
2210010C04RikQ9CPN9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
2210010C04RikQ9CPN9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
2210010C04RikQ9CPN9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
2210010C04RikQ9CPN9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
2210010C04RikQ9CPN9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
2210010C04RikQ9CPN9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
2210010C04RikQ9CPN9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
2210010C04RikQ9CPN9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
2210010C04RikQ9CPN9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
2210010C04RikQ9CPN9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
2210010C04RikQ9CPN9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
2210010C04RikQ9CPN9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
2210010C04RikQ9CPN9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
2210010C04RikQ9CPN9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
2210010C04RikQ9CPN9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
2210010C04RikQ9CPN9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.05■□□□□ 0.16
2210010C04RikQ9CPN9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
2210010C04RikQ9CPN9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
2210010C04RikQ9CPN9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
2210010C04RikQ9CPN9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
2210010C04RikQ9CPN9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
2210010C04RikQ9CPN9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
2210010C04RikQ9CPN9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
2210010C04RikQ9CPN9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms