Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.09■□□□□ 0.49
Msh4Q99MT2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Msh4Q99MT2 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Msh4Q99MT2 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.09■□□□□ 0.49
Msh4Q99MT2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Msh4Q99MT2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Msh4Q99MT2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Msh4Q99MT2 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Msh4Q99MT2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Msh4Q99MT2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Msh4Q99MT2 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Msh4Q99MT2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Msh4Q99MT2 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Msh4Q99MT2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Msh4Q99MT2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.08■□□□□ 0.49
Msh4Q99MT2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Msh4Q99MT2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Msh4Q99MT2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Msh4Q99MT2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Msh4Q99MT2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Msh4Q99MT2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.08■□□□□ 0.48
Msh4Q99MT2 Gm38205-201ENSMUST00000192243 258 ntBASIC18.08■□□□□ 0.48
Msh4Q99MT2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Msh4Q99MT2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Msh4Q99MT2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Msh4Q99MT2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Msh4Q99MT2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Msh4Q99MT2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Msh4Q99MT2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Msh4Q99MT2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Msh4Q99MT2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Msh4Q99MT2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Msh4Q99MT2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Msh4Q99MT2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Msh4Q99MT2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Msh4Q99MT2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Msh4Q99MT2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Msh4Q99MT2 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Msh4Q99MT2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.07■□□□□ 0.48
Msh4Q99MT2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Msh4Q99MT2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Msh4Q99MT2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Msh4Q99MT2 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Msh4Q99MT2 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Msh4Q99MT2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Msh4Q99MT2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Msh4Q99MT2 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh4Q99MT2 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Msh4Q99MT2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Msh4Q99MT2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Msh4Q99MT2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.06■□□□□ 0.48
Msh4Q99MT2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Msh4Q99MT2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh4Q99MT2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Msh4Q99MT2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh4Q99MT2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.05■□□□□ 0.48
Msh4Q99MT2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh4Q99MT2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh4Q99MT2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh4Q99MT2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Msh4Q99MT2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Msh4Q99MT2 Gm37179-201ENSMUST00000194862 823 ntBASIC18.05■□□□□ 0.48
Msh4Q99MT2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.05■□□□□ 0.48
Msh4Q99MT2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.05■□□□□ 0.48
Msh4Q99MT2 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.05■□□□□ 0.48
Msh4Q99MT2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Msh4Q99MT2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Msh4Q99MT2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh4Q99MT2 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh4Q99MT2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Msh4Q99MT2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh4Q99MT2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Msh4Q99MT2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh4Q99MT2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh4Q99MT2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh4Q99MT2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Msh4Q99MT2 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.04■□□□□ 0.48
Msh4Q99MT2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh4Q99MT2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh4Q99MT2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh4Q99MT2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Msh4Q99MT2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.04■□□□□ 0.48
Msh4Q99MT2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh4Q99MT2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh4Q99MT2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Msh4Q99MT2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Msh4Q99MT2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.04■□□□□ 0.48
Msh4Q99MT2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh4Q99MT2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Msh4Q99MT2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh4Q99MT2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.04■□□□□ 0.48
Msh4Q99MT2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh4Q99MT2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh4Q99MT2 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.04■□□□□ 0.48
Msh4Q99MT2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh4Q99MT2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Msh4Q99MT2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Msh4Q99MT2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Msh4Q99MT2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Msh4Q99MT2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 145.2 ms