Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col25a1Q99MQ5 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col25a1Q99MQ5 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Col25a1Q99MQ5 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col25a1Q99MQ5 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col25a1Q99MQ5 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col25a1Q99MQ5 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Col25a1Q99MQ5 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col25a1Q99MQ5 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col25a1Q99MQ5 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col25a1Q99MQ5 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col25a1Q99MQ5 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col25a1Q99MQ5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col25a1Q99MQ5 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.3■□□□□ 0.68
Col25a1Q99MQ5 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col25a1Q99MQ5 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col25a1Q99MQ5 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col25a1Q99MQ5 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Col25a1Q99MQ5 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col25a1Q99MQ5 Gm44549-201ENSMUST00000208351 577 ntBASIC19.3■□□□□ 0.68
Col25a1Q99MQ5 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col25a1Q99MQ5 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col25a1Q99MQ5 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col25a1Q99MQ5 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col25a1Q99MQ5 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col25a1Q99MQ5 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Col25a1Q99MQ5 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Col25a1Q99MQ5 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col25a1Q99MQ5 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col25a1Q99MQ5 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col25a1Q99MQ5 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col25a1Q99MQ5 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Col25a1Q99MQ5 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.28■□□□□ 0.68
Col25a1Q99MQ5 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col25a1Q99MQ5 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col25a1Q99MQ5 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col25a1Q99MQ5 Gm7153-201ENSMUST00000117092 455 ntBASIC19.28■□□□□ 0.68
Col25a1Q99MQ5 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col25a1Q99MQ5 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col25a1Q99MQ5 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.28■□□□□ 0.68
Col25a1Q99MQ5 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.28■□□□□ 0.68
Col25a1Q99MQ5 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Col25a1Q99MQ5 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col25a1Q99MQ5 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.27■□□□□ 0.68
Col25a1Q99MQ5 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col25a1Q99MQ5 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.27■□□□□ 0.68
Col25a1Q99MQ5 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Col25a1Q99MQ5 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Col25a1Q99MQ5 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col25a1Q99MQ5 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.27■□□□□ 0.68
Col25a1Q99MQ5 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col25a1Q99MQ5 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Col25a1Q99MQ5 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col25a1Q99MQ5 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Col25a1Q99MQ5 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col25a1Q99MQ5 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Col25a1Q99MQ5 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.27■□□□□ 0.67
Col25a1Q99MQ5 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Col25a1Q99MQ5 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Col25a1Q99MQ5 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col25a1Q99MQ5 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col25a1Q99MQ5 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col25a1Q99MQ5 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col25a1Q99MQ5 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Col25a1Q99MQ5 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.26■□□□□ 0.67
Col25a1Q99MQ5 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.26■□□□□ 0.67
Col25a1Q99MQ5 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col25a1Q99MQ5 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col25a1Q99MQ5 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col25a1Q99MQ5 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col25a1Q99MQ5 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
Col25a1Q99MQ5 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col25a1Q99MQ5 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Col25a1Q99MQ5 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Col25a1Q99MQ5 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Col25a1Q99MQ5 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Col25a1Q99MQ5 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.25■□□□□ 0.67
Col25a1Q99MQ5 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col25a1Q99MQ5 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col25a1Q99MQ5 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col25a1Q99MQ5 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Col25a1Q99MQ5 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col25a1Q99MQ5 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col25a1Q99MQ5 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col25a1Q99MQ5 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Col25a1Q99MQ5 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Col25a1Q99MQ5 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Col25a1Q99MQ5 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Col25a1Q99MQ5 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.25■□□□□ 0.67
Col25a1Q99MQ5 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col25a1Q99MQ5 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col25a1Q99MQ5 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Col25a1Q99MQ5 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Col25a1Q99MQ5 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col25a1Q99MQ5 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Col25a1Q99MQ5 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Col25a1Q99MQ5 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.24■□□□□ 0.67
Col25a1Q99MQ5 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col25a1Q99MQ5 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.24■□□□□ 0.67
Col25a1Q99MQ5 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms