Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.02■□□□□ 0.48
Rnf111Q99ML9 Gm43060-201ENSMUST00000200621 289 ntBASIC18.02■□□□□ 0.48
Rnf111Q99ML9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf111Q99ML9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf111Q99ML9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf111Q99ML9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf111Q99ML9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf111Q99ML9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf111Q99ML9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rnf111Q99ML9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
Rnf111Q99ML9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rnf111Q99ML9 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Rnf111Q99ML9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Rnf111Q99ML9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf111Q99ML9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf111Q99ML9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf111Q99ML9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf111Q99ML9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf111Q99ML9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Rnf111Q99ML9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Rnf111Q99ML9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.01■□□□□ 0.47
Rnf111Q99ML9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.01■□□□□ 0.47
Rnf111Q99ML9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf111Q99ML9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.01■□□□□ 0.47
Rnf111Q99ML9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.01■□□□□ 0.47
Rnf111Q99ML9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf111Q99ML9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf111Q99ML9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf111Q99ML9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf111Q99ML9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf111Q99ML9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf111Q99ML9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18■□□□□ 0.47
Rnf111Q99ML9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18■□□□□ 0.47
Rnf111Q99ML9 Gm27801-201ENSMUST00000184174 223 ntBASIC18■□□□□ 0.47
Rnf111Q99ML9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf111Q99ML9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf111Q99ML9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf111Q99ML9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Rnf111Q99ML9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf111Q99ML9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf111Q99ML9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf111Q99ML9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf111Q99ML9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf111Q99ML9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf111Q99ML9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf111Q99ML9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf111Q99ML9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Rnf111Q99ML9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf111Q99ML9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Rnf111Q99ML9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf111Q99ML9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
Rnf111Q99ML9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf111Q99ML9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf111Q99ML9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf111Q99ML9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
Rnf111Q99ML9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf111Q99ML9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.99■□□□□ 0.47
Rnf111Q99ML9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Rnf111Q99ML9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf111Q99ML9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.98■□□□□ 0.47
Rnf111Q99ML9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf111Q99ML9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf111Q99ML9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf111Q99ML9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf111Q99ML9 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.98■□□□□ 0.47
Rnf111Q99ML9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf111Q99ML9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.98■□□□□ 0.47
Rnf111Q99ML9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf111Q99ML9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf111Q99ML9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Rnf111Q99ML9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf111Q99ML9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf111Q99ML9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf111Q99ML9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf111Q99ML9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf111Q99ML9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf111Q99ML9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.98■□□□□ 0.47
Rnf111Q99ML9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf111Q99ML9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Rnf111Q99ML9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf111Q99ML9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf111Q99ML9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf111Q99ML9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf111Q99ML9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.97■□□□□ 0.47
Rnf111Q99ML9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Rnf111Q99ML9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.97■□□□□ 0.47
Rnf111Q99ML9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf111Q99ML9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf111Q99ML9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Rnf111Q99ML9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf111Q99ML9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf111Q99ML9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Rnf111Q99ML9 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf111Q99ML9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf111Q99ML9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf111Q99ML9 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.96■□□□□ 0.47
Rnf111Q99ML9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf111Q99ML9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf111Q99ML9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf111Q99ML9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms