Protein–RNA interactions for Protein: Q99ME3

Sncaip, Synphilin-1, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaipQ99ME3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SncaipQ99ME3 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SncaipQ99ME3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SncaipQ99ME3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SncaipQ99ME3 AV356131-201ENSMUST00000206201 750 ntBASIC19.22■□□□□ 0.67
SncaipQ99ME3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SncaipQ99ME3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SncaipQ99ME3 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SncaipQ99ME3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SncaipQ99ME3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SncaipQ99ME3 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SncaipQ99ME3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SncaipQ99ME3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SncaipQ99ME3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SncaipQ99ME3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SncaipQ99ME3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SncaipQ99ME3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SncaipQ99ME3 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SncaipQ99ME3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.21■□□□□ 0.67
SncaipQ99ME3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SncaipQ99ME3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SncaipQ99ME3 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
SncaipQ99ME3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SncaipQ99ME3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SncaipQ99ME3 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SncaipQ99ME3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SncaipQ99ME3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SncaipQ99ME3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SncaipQ99ME3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SncaipQ99ME3 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SncaipQ99ME3 Nespas-201ENSMUST00000143738 1083 ntBASIC19.2■□□□□ 0.66
SncaipQ99ME3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SncaipQ99ME3 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SncaipQ99ME3 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SncaipQ99ME3 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SncaipQ99ME3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SncaipQ99ME3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SncaipQ99ME3 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.2■□□□□ 0.66
SncaipQ99ME3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SncaipQ99ME3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SncaipQ99ME3 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SncaipQ99ME3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SncaipQ99ME3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SncaipQ99ME3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SncaipQ99ME3 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.19■□□□□ 0.66
SncaipQ99ME3 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SncaipQ99ME3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SncaipQ99ME3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SncaipQ99ME3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.18■□□□□ 0.66
SncaipQ99ME3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SncaipQ99ME3 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SncaipQ99ME3 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SncaipQ99ME3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SncaipQ99ME3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
SncaipQ99ME3 Gm6420-201ENSMUST00000193885 723 ntBASIC19.18■□□□□ 0.66
SncaipQ99ME3 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.18■□□□□ 0.66
SncaipQ99ME3 Gm7514-201ENSMUST00000209475 934 ntBASIC19.18■□□□□ 0.66
SncaipQ99ME3 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.18■□□□□ 0.66
SncaipQ99ME3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SncaipQ99ME3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SncaipQ99ME3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SncaipQ99ME3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SncaipQ99ME3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SncaipQ99ME3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SncaipQ99ME3 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SncaipQ99ME3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.17■□□□□ 0.66
SncaipQ99ME3 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.17■□□□□ 0.66
SncaipQ99ME3 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SncaipQ99ME3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SncaipQ99ME3 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.17■□□□□ 0.66
SncaipQ99ME3 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SncaipQ99ME3 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SncaipQ99ME3 Gm42569-201ENSMUST00000200539 472 ntBASIC19.17■□□□□ 0.66
SncaipQ99ME3 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SncaipQ99ME3 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SncaipQ99ME3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SncaipQ99ME3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SncaipQ99ME3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SncaipQ99ME3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.17■□□□□ 0.66
SncaipQ99ME3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
SncaipQ99ME3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SncaipQ99ME3 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SncaipQ99ME3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SncaipQ99ME3 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SncaipQ99ME3 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SncaipQ99ME3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SncaipQ99ME3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SncaipQ99ME3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SncaipQ99ME3 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
SncaipQ99ME3 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.16■□□□□ 0.66
SncaipQ99ME3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SncaipQ99ME3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SncaipQ99ME3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SncaipQ99ME3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SncaipQ99ME3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SncaipQ99ME3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SncaipQ99ME3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.15■□□□□ 0.66
SncaipQ99ME3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SncaipQ99ME3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SncaipQ99ME3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms