Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scrt1Q99M85 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.27■□□□□ 0.2
Scrt1Q99M85 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scrt1Q99M85 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scrt1Q99M85 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Scrt1Q99M85 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.27■□□□□ 0.2
Scrt1Q99M85 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scrt1Q99M85 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Scrt1Q99M85 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.27■□□□□ 0.19
Scrt1Q99M85 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.27■□□□□ 0.19
Scrt1Q99M85 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Scrt1Q99M85 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.27■□□□□ 0.19
Scrt1Q99M85 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scrt1Q99M85 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scrt1Q99M85 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scrt1Q99M85 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Scrt1Q99M85 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scrt1Q99M85 Gm15565-201ENSMUST00000118890 427 ntBASIC16.26■□□□□ 0.19
Scrt1Q99M85 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.26■□□□□ 0.19
Scrt1Q99M85 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.26■□□□□ 0.19
Scrt1Q99M85 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Scrt1Q99M85 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Scrt1Q99M85 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Scrt1Q99M85 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Scrt1Q99M85 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Scrt1Q99M85 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scrt1Q99M85 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Scrt1Q99M85 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Scrt1Q99M85 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scrt1Q99M85 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.25■□□□□ 0.19
Scrt1Q99M85 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Scrt1Q99M85 Gm715-201ENSMUST00000117865 831 ntBASIC16.25■□□□□ 0.19
Scrt1Q99M85 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.25■□□□□ 0.19
Scrt1Q99M85 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Scrt1Q99M85 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.25■□□□□ 0.19
Scrt1Q99M85 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.25■□□□□ 0.19
Scrt1Q99M85 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scrt1Q99M85 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scrt1Q99M85 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scrt1Q99M85 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Scrt1Q99M85 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Scrt1Q99M85 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.25■□□□□ 0.19
Scrt1Q99M85 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scrt1Q99M85 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scrt1Q99M85 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Scrt1Q99M85 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.24■□□□□ 0.19
Scrt1Q99M85 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scrt1Q99M85 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Scrt1Q99M85 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Scrt1Q99M85 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Scrt1Q99M85 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Scrt1Q99M85 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Scrt1Q99M85 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Scrt1Q99M85 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Scrt1Q99M85 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Scrt1Q99M85 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.24■□□□□ 0.19
Scrt1Q99M85 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scrt1Q99M85 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scrt1Q99M85 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scrt1Q99M85 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scrt1Q99M85 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.24■□□□□ 0.19
Scrt1Q99M85 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.24■□□□□ 0.19
Scrt1Q99M85 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scrt1Q99M85 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scrt1Q99M85 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scrt1Q99M85 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Scrt1Q99M85 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scrt1Q99M85 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scrt1Q99M85 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scrt1Q99M85 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scrt1Q99M85 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scrt1Q99M85 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.23■□□□□ 0.19
Scrt1Q99M85 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scrt1Q99M85 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scrt1Q99M85 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scrt1Q99M85 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scrt1Q99M85 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.23■□□□□ 0.19
Scrt1Q99M85 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scrt1Q99M85 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Scrt1Q99M85 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scrt1Q99M85 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.23■□□□□ 0.19
Scrt1Q99M85 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scrt1Q99M85 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scrt1Q99M85 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Scrt1Q99M85 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Scrt1Q99M85 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scrt1Q99M85 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Scrt1Q99M85 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Scrt1Q99M85 AA386476-201ENSMUST00000098781 1665 ntBASIC16.22■□□□□ 0.19
Scrt1Q99M85 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Scrt1Q99M85 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.22■□□□□ 0.19
Scrt1Q99M85 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scrt1Q99M85 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.22■□□□□ 0.19
Scrt1Q99M85 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.22■□□□□ 0.19
Scrt1Q99M85 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.22■□□□□ 0.19
Scrt1Q99M85 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scrt1Q99M85 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Scrt1Q99M85 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Scrt1Q99M85 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.22■□□□□ 0.19
Scrt1Q99M85 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms