Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lysmd3Q99LE3 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lysmd3Q99LE3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lysmd3Q99LE3 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.3■□□□□ 0.68
Lysmd3Q99LE3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.3■□□□□ 0.68
Lysmd3Q99LE3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.3■□□□□ 0.68
Lysmd3Q99LE3 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lysmd3Q99LE3 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lysmd3Q99LE3 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lysmd3Q99LE3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lysmd3Q99LE3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Lysmd3Q99LE3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.29■□□□□ 0.68
Lysmd3Q99LE3 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.29■□□□□ 0.68
Lysmd3Q99LE3 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.29■□□□□ 0.68
Lysmd3Q99LE3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lysmd3Q99LE3 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.29■□□□□ 0.68
Lysmd3Q99LE3 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Lysmd3Q99LE3 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Lysmd3Q99LE3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Lysmd3Q99LE3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lysmd3Q99LE3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lysmd3Q99LE3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lysmd3Q99LE3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lysmd3Q99LE3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd3Q99LE3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd3Q99LE3 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd3Q99LE3 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd3Q99LE3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd3Q99LE3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.28■□□□□ 0.68
Lysmd3Q99LE3 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd3Q99LE3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.28■□□□□ 0.68
Lysmd3Q99LE3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd3Q99LE3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd3Q99LE3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Lysmd3Q99LE3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd3Q99LE3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd3Q99LE3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd3Q99LE3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd3Q99LE3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lysmd3Q99LE3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lysmd3Q99LE3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lysmd3Q99LE3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lysmd3Q99LE3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lysmd3Q99LE3 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lysmd3Q99LE3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.27■□□□□ 0.68
Lysmd3Q99LE3 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.27■□□□□ 0.68
Lysmd3Q99LE3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lysmd3Q99LE3 Rab3c-203ENSMUST00000224180 967 ntBASIC19.27■□□□□ 0.68
Lysmd3Q99LE3 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lysmd3Q99LE3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lysmd3Q99LE3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Lysmd3Q99LE3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lysmd3Q99LE3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lysmd3Q99LE3 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lysmd3Q99LE3 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lysmd3Q99LE3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lysmd3Q99LE3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Lysmd3Q99LE3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lysmd3Q99LE3 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.26■□□□□ 0.67
Lysmd3Q99LE3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lysmd3Q99LE3 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lysmd3Q99LE3 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lysmd3Q99LE3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lysmd3Q99LE3 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.26■□□□□ 0.67
Lysmd3Q99LE3 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lysmd3Q99LE3 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lysmd3Q99LE3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lysmd3Q99LE3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lysmd3Q99LE3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lysmd3Q99LE3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.25■□□□□ 0.67
Lysmd3Q99LE3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lysmd3Q99LE3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lysmd3Q99LE3 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lysmd3Q99LE3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.25■□□□□ 0.67
Lysmd3Q99LE3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.25■□□□□ 0.67
Lysmd3Q99LE3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lysmd3Q99LE3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lysmd3Q99LE3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lysmd3Q99LE3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lysmd3Q99LE3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lysmd3Q99LE3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lysmd3Q99LE3 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lysmd3Q99LE3 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lysmd3Q99LE3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lysmd3Q99LE3 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lysmd3Q99LE3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lysmd3Q99LE3 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.24■□□□□ 0.67
Lysmd3Q99LE3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.24■□□□□ 0.67
Lysmd3Q99LE3 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Lysmd3Q99LE3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lysmd3Q99LE3 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.24■□□□□ 0.67
Lysmd3Q99LE3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lysmd3Q99LE3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lysmd3Q99LE3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lysmd3Q99LE3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd3Q99LE3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd3Q99LE3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd3Q99LE3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd3Q99LE3 Gm12527-201ENSMUST00000117967 564 ntBASIC19.23■□□□□ 0.67
Lysmd3Q99LE3 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms