Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cstf1Q99LC2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cstf1Q99LC2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cstf1Q99LC2 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.56■□□□□ 0.56
Cstf1Q99LC2 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cstf1Q99LC2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cstf1Q99LC2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cstf1Q99LC2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cstf1Q99LC2 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Cstf1Q99LC2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cstf1Q99LC2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cstf1Q99LC2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.56■□□□□ 0.56
Cstf1Q99LC2 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cstf1Q99LC2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cstf1Q99LC2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cstf1Q99LC2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Cstf1Q99LC2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cstf1Q99LC2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cstf1Q99LC2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cstf1Q99LC2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cstf1Q99LC2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cstf1Q99LC2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.55■□□□□ 0.56
Cstf1Q99LC2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cstf1Q99LC2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.55■□□□□ 0.56
Cstf1Q99LC2 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.55■□□□□ 0.56
Cstf1Q99LC2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cstf1Q99LC2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cstf1Q99LC2 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Cstf1Q99LC2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cstf1Q99LC2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cstf1Q99LC2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cstf1Q99LC2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cstf1Q99LC2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cstf1Q99LC2 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Cstf1Q99LC2 Gm21362-201ENSMUST00000194272 928 ntBASIC18.54■□□□□ 0.56
Cstf1Q99LC2 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cstf1Q99LC2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.54■□□□□ 0.56
Cstf1Q99LC2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cstf1Q99LC2 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cstf1Q99LC2 Gm10819-201ENSMUST00000099988 561 ntBASIC18.54■□□□□ 0.56
Cstf1Q99LC2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cstf1Q99LC2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cstf1Q99LC2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cstf1Q99LC2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Cstf1Q99LC2 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cstf1Q99LC2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cstf1Q99LC2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.53■□□□□ 0.56
Cstf1Q99LC2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cstf1Q99LC2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cstf1Q99LC2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Cstf1Q99LC2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Cstf1Q99LC2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cstf1Q99LC2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.53■□□□□ 0.56
Cstf1Q99LC2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cstf1Q99LC2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cstf1Q99LC2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cstf1Q99LC2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cstf1Q99LC2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cstf1Q99LC2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cstf1Q99LC2 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.52■□□□□ 0.56
Cstf1Q99LC2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Cstf1Q99LC2 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cstf1Q99LC2 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cstf1Q99LC2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Cstf1Q99LC2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
Cstf1Q99LC2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
Cstf1Q99LC2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cstf1Q99LC2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cstf1Q99LC2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cstf1Q99LC2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cstf1Q99LC2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Cstf1Q99LC2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cstf1Q99LC2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cstf1Q99LC2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cstf1Q99LC2 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Cstf1Q99LC2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cstf1Q99LC2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Cstf1Q99LC2 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cstf1Q99LC2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cstf1Q99LC2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cstf1Q99LC2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cstf1Q99LC2 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cstf1Q99LC2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cstf1Q99LC2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.51■□□□□ 0.55
Cstf1Q99LC2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cstf1Q99LC2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cstf1Q99LC2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cstf1Q99LC2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Cstf1Q99LC2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cstf1Q99LC2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cstf1Q99LC2 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cstf1Q99LC2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Cstf1Q99LC2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cstf1Q99LC2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.5■□□□□ 0.55
Cstf1Q99LC2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cstf1Q99LC2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cstf1Q99LC2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cstf1Q99LC2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.5■□□□□ 0.55
Cstf1Q99LC2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cstf1Q99LC2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms