Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp1aQ921W0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Chmp1aQ921W0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp1aQ921W0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp1aQ921W0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp1aQ921W0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Chmp1aQ921W0 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Chmp1aQ921W0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.41■□□□□ 0.22
Chmp1aQ921W0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp1aQ921W0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp1aQ921W0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp1aQ921W0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp1aQ921W0 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp1aQ921W0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp1aQ921W0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp1aQ921W0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.41■□□□□ 0.22
Chmp1aQ921W0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp1aQ921W0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Chmp1aQ921W0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp1aQ921W0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.4■□□□□ 0.22
Chmp1aQ921W0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp1aQ921W0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp1aQ921W0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.4■□□□□ 0.22
Chmp1aQ921W0 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.4■□□□□ 0.22
Chmp1aQ921W0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp1aQ921W0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp1aQ921W0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp1aQ921W0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp1aQ921W0 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp1aQ921W0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Chmp1aQ921W0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp1aQ921W0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.39■□□□□ 0.21
Chmp1aQ921W0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp1aQ921W0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp1aQ921W0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp1aQ921W0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Chmp1aQ921W0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp1aQ921W0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp1aQ921W0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp1aQ921W0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp1aQ921W0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.39■□□□□ 0.21
Chmp1aQ921W0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Chmp1aQ921W0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Chmp1aQ921W0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp1aQ921W0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
Chmp1aQ921W0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp1aQ921W0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp1aQ921W0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp1aQ921W0 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp1aQ921W0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.38■□□□□ 0.21
Chmp1aQ921W0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp1aQ921W0 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.38■□□□□ 0.21
Chmp1aQ921W0 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Chmp1aQ921W0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
Chmp1aQ921W0 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.38■□□□□ 0.21
Chmp1aQ921W0 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp1aQ921W0 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.37■□□□□ 0.21
Chmp1aQ921W0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.37■□□□□ 0.21
Chmp1aQ921W0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp1aQ921W0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp1aQ921W0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp1aQ921W0 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp1aQ921W0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Chmp1aQ921W0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp1aQ921W0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp1aQ921W0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Chmp1aQ921W0 Gm22238-201ENSMUST00000175222 88 ntBASIC16.37■□□□□ 0.21
Chmp1aQ921W0 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.37■□□□□ 0.21
Chmp1aQ921W0 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp1aQ921W0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Chmp1aQ921W0 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp1aQ921W0 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp1aQ921W0 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp1aQ921W0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp1aQ921W0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp1aQ921W0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp1aQ921W0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.36■□□□□ 0.21
Chmp1aQ921W0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.36■□□□□ 0.21
Chmp1aQ921W0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.36■□□□□ 0.21
Chmp1aQ921W0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp1aQ921W0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
Chmp1aQ921W0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp1aQ921W0 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp1aQ921W0 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Chmp1aQ921W0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp1aQ921W0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp1aQ921W0 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp1aQ921W0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp1aQ921W0 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.35■□□□□ 0.21
Chmp1aQ921W0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.35■□□□□ 0.21
Chmp1aQ921W0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.35■□□□□ 0.21
Chmp1aQ921W0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp1aQ921W0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp1aQ921W0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp1aQ921W0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp1aQ921W0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.35■□□□□ 0.21
Chmp1aQ921W0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp1aQ921W0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp1aQ921W0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Chmp1aQ921W0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms