Protein–RNA interactions for Protein: Q91Y09

Pcdhac2, Protocadherin alpha C2, mousemouse

Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2Q91Y09 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhac2Q91Y09 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Pcdhac2Q91Y09 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Pcdhac2Q91Y09 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Pcdhac2Q91Y09 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Pcdhac2Q91Y09 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.28■□□□□ 0.84
Pcdhac2Q91Y09 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhac2Q91Y09 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhac2Q91Y09 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhac2Q91Y09 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhac2Q91Y09 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhac2Q91Y09 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhac2Q91Y09 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhac2Q91Y09 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.28■□□□□ 0.84
Pcdhac2Q91Y09 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhac2Q91Y09 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhac2Q91Y09 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhac2Q91Y09 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.27■□□□□ 0.84
Pcdhac2Q91Y09 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhac2Q91Y09 Mir1199-201ENSMUST00000117015 119 ntBASIC20.27■□□□□ 0.84
Pcdhac2Q91Y09 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhac2Q91Y09 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Pcdhac2Q91Y09 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.27■□□□□ 0.84
Pcdhac2Q91Y09 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.27■□□□□ 0.84
Pcdhac2Q91Y09 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhac2Q91Y09 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhac2Q91Y09 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhac2Q91Y09 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhac2Q91Y09 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhac2Q91Y09 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.26■□□□□ 0.83
Pcdhac2Q91Y09 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhac2Q91Y09 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Pcdhac2Q91Y09 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.26■□□□□ 0.83
Pcdhac2Q91Y09 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhac2Q91Y09 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhac2Q91Y09 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Pcdhac2Q91Y09 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.26■□□□□ 0.83
Pcdhac2Q91Y09 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhac2Q91Y09 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pcdhac2Q91Y09 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhac2Q91Y09 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhac2Q91Y09 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhac2Q91Y09 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhac2Q91Y09 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhac2Q91Y09 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhac2Q91Y09 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhac2Q91Y09 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhac2Q91Y09 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhac2Q91Y09 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhac2Q91Y09 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhac2Q91Y09 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Pcdhac2Q91Y09 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhac2Q91Y09 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhac2Q91Y09 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhac2Q91Y09 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Pcdhac2Q91Y09 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhac2Q91Y09 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhac2Q91Y09 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhac2Q91Y09 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhac2Q91Y09 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.24■□□□□ 0.83
Pcdhac2Q91Y09 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.24■□□□□ 0.83
Pcdhac2Q91Y09 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.24■□□□□ 0.83
Pcdhac2Q91Y09 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.24■□□□□ 0.83
Pcdhac2Q91Y09 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhac2Q91Y09 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhac2Q91Y09 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhac2Q91Y09 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.23■□□□□ 0.83
Pcdhac2Q91Y09 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhac2Q91Y09 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhac2Q91Y09 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhac2Q91Y09 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhac2Q91Y09 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Pcdhac2Q91Y09 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.23■□□□□ 0.83
Pcdhac2Q91Y09 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhac2Q91Y09 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhac2Q91Y09 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhac2Q91Y09 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Pcdhac2Q91Y09 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhac2Q91Y09 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Pcdhac2Q91Y09 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Pcdhac2Q91Y09 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.22■□□□□ 0.83
Pcdhac2Q91Y09 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhac2Q91Y09 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhac2Q91Y09 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Pcdhac2Q91Y09 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhac2Q91Y09 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhac2Q91Y09 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhac2Q91Y09 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Pcdhac2Q91Y09 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhac2Q91Y09 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhac2Q91Y09 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhac2Q91Y09 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhac2Q91Y09 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhac2Q91Y09 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhac2Q91Y09 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhac2Q91Y09 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.21■□□□□ 0.83
Pcdhac2Q91Y09 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhac2Q91Y09 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Pcdhac2Q91Y09 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhac2Q91Y09 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms