Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb3Q91XZ7 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb3Q91XZ7 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.52■□□□□ 0.56
Pcdhb3Q91XZ7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhb3Q91XZ7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.52■□□□□ 0.55
Pcdhb3Q91XZ7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb3Q91XZ7 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Pcdhb3Q91XZ7 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb3Q91XZ7 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb3Q91XZ7 Gm43137-201ENSMUST00000198052 594 ntBASIC18.51■□□□□ 0.55
Pcdhb3Q91XZ7 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb3Q91XZ7 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Pcdhb3Q91XZ7 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Pcdhb3Q91XZ7 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb3Q91XZ7 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb3Q91XZ7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Pcdhb3Q91XZ7 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb3Q91XZ7 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb3Q91XZ7 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb3Q91XZ7 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb3Q91XZ7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb3Q91XZ7 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb3Q91XZ7 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb3Q91XZ7 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb3Q91XZ7 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb3Q91XZ7 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhb3Q91XZ7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb3Q91XZ7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb3Q91XZ7 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb3Q91XZ7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb3Q91XZ7 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdhb3Q91XZ7 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb3Q91XZ7 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb3Q91XZ7 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb3Q91XZ7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb3Q91XZ7 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb3Q91XZ7 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb3Q91XZ7 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhb3Q91XZ7 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb3Q91XZ7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb3Q91XZ7 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.49■□□□□ 0.55
Pcdhb3Q91XZ7 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
Pcdhb3Q91XZ7 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhb3Q91XZ7 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb3Q91XZ7 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb3Q91XZ7 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.49■□□□□ 0.55
Pcdhb3Q91XZ7 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb3Q91XZ7 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb3Q91XZ7 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb3Q91XZ7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb3Q91XZ7 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb3Q91XZ7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.49■□□□□ 0.55
Pcdhb3Q91XZ7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Pcdhb3Q91XZ7 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Pcdhb3Q91XZ7 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb3Q91XZ7 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Pcdhb3Q91XZ7 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb3Q91XZ7 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Pcdhb3Q91XZ7 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb3Q91XZ7 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Pcdhb3Q91XZ7 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb3Q91XZ7 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Pcdhb3Q91XZ7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb3Q91XZ7 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb3Q91XZ7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb3Q91XZ7 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb3Q91XZ7 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb3Q91XZ7 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.47■□□□□ 0.55
Pcdhb3Q91XZ7 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb3Q91XZ7 Gm6139-201ENSMUST00000079261 882 ntBASIC18.47■□□□□ 0.55
Pcdhb3Q91XZ7 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb3Q91XZ7 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pcdhb3Q91XZ7 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb3Q91XZ7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb3Q91XZ7 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb3Q91XZ7 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb3Q91XZ7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb3Q91XZ7 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb3Q91XZ7 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb3Q91XZ7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb3Q91XZ7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
Pcdhb3Q91XZ7 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb3Q91XZ7 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb3Q91XZ7 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Pcdhb3Q91XZ7 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb3Q91XZ7 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb3Q91XZ7 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdhb3Q91XZ7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.46■□□□□ 0.55
Pcdhb3Q91XZ7 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Pcdhb3Q91XZ7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.46■□□□□ 0.55
Pcdhb3Q91XZ7 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb3Q91XZ7 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb3Q91XZ7 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb3Q91XZ7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb3Q91XZ7 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb3Q91XZ7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb3Q91XZ7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.46■□□□□ 0.54
Pcdhb3Q91XZ7 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb3Q91XZ7 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb3Q91XZ7 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms